Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   FGL14_RS04610 Genome accession   NZ_LR594045
Coordinates   868444..870189 (+) Length   581 a.a.
NCBI ID   WP_138083837.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 863444..875189
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL14_RS04590 (NCTC9413_00949) - 863906..864286 (+) 381 WP_003056276.1 DUF1149 family protein -
  FGL14_RS04595 (NCTC9413_00950) - 864286..865134 (+) 849 WP_003056308.1 DegV family protein -
  FGL14_RS04600 (NCTC9413_00951) - 865254..866462 (+) 1209 WP_172453890.1 CCA tRNA nucleotidyltransferase -
  FGL14_RS04605 (NCTC9413_00952) - 866459..868336 (+) 1878 WP_138083836.1 ABC-F family ATP-binding cassette domain-containing protein -
  FGL14_RS04610 (NCTC9413_00953) rcrP 868444..870189 (+) 1746 WP_138083837.1 ABC transporter ATP-binding protein Regulator
  FGL14_RS04615 (NCTC9413_00954) rcrQ 870189..871961 (+) 1773 WP_015016916.1 ABC transporter ATP-binding protein Regulator
  FGL14_RS04620 (NCTC9413_00955) gdhA 872151..873500 (+) 1350 WP_003056314.1 NADP-specific glutamate dehydrogenase -
  FGL14_RS04625 (NCTC9413_00956) - 873625..874035 (+) 411 WP_012766836.1 peptide deformylase -

Sequence

Protein


Download         Length: 581 a.a.        Molecular weight: 65224.88 Da        Isoelectric Point: 5.8130

>NTDB_id=1005666 FGL14_RS04610 WP_138083837.1 868444..870189(+) (rcrP) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413]
MGLIWSYLSSKPKWLALDILGGLLFVLVNLGLPTILARMIDQGILQQDTKALYGWTLVMFVIIVLGVLGRIILSYASGKL
TTTMIKELRNDMYRQLQDYSHTEYEKIGVASLVTRMTSDAFVLMQFAEMSLRLGVVTPLMMIFSVLMIFLTSPSLAWIVA
VSMPFLVLVVVYVAVKTRPLSEKQQESLDHINQLVRENLTGLRVIRAFSREAFQQERFDERNQEYAGISKRLFTLTGLTE
PLFVQIIIAMIVAIVWFALDPLAKGQIQIGDLVAFIEYSFHALFSFLMFANLFTMYPKMAVSSKRIKEVMDMPISISKNE
DGVTETLTRGYLEFDNVTFAYPGETESPVLHNISFKTKPGETIAFIGSTGSGKSSLVNLIPRFYDVTFGRILVDGVDVRD
YRLKSLRAKIGFIPQKALLFTGTIEDNLKYGKADASYWELDEATDVSQARAFIASREKGYQTHLAEAGSNLSGGQKQRLS
IARAVVKKPDIYIFDDSFSALDYQTDAALRKRLKEVTEEATVLIVAQRVGTIMDADQIIVLDQGEIVGRGKHEELMATNA
IYREIADSQLNKGNLMEEEVD

Nucleotide


Download         Length: 1746 bp        

>NTDB_id=1005666 FGL14_RS04610 WP_138083837.1 868444..870189(+) (rcrP) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413]
ATGGGACTGATTTGGTCGTATTTATCATCAAAGCCTAAGTGGTTGGCTTTGGACATTTTAGGTGGTCTATTATTTGTTCT
GGTTAATTTAGGATTGCCCACTATTTTAGCTCGGATGATAGACCAAGGAATCTTGCAGCAGGATACCAAAGCCTTATATG
GCTGGACATTGGTCATGTTTGTCATTATTGTGTTAGGTGTTCTTGGTCGAATTATCTTATCCTATGCATCTGGTAAGTTA
ACGACAACCATGATCAAGGAGCTGCGCAATGACATGTATCGTCAGTTGCAGGATTACTCTCATACAGAATATGAAAAAAT
TGGGGTTGCTTCTTTGGTTACCCGAATGACAAGTGATGCCTTTGTGCTCATGCAGTTTGCTGAAATGTCTTTACGTTTAG
GAGTAGTGACGCCCTTAATGATGATTTTTTCAGTGCTGATGATTTTCTTGACAAGTCCATCGTTAGCATGGATTGTGGCG
GTATCCATGCCTTTTTTGGTGCTGGTTGTTGTTTATGTCGCCGTCAAAACAAGGCCTCTCTCTGAAAAACAACAAGAAAG
TCTAGACCACATTAATCAGTTAGTCAGAGAAAATTTGACTGGTTTGCGCGTGATTAGAGCCTTTTCGAGAGAAGCATTTC
AACAGGAACGTTTTGATGAGCGTAATCAAGAATACGCCGGCATTTCTAAACGTCTCTTCACCTTAACAGGATTGACAGAA
CCGCTATTTGTGCAAATCATTATTGCCATGATTGTAGCCATTGTTTGGTTTGCCTTAGACCCTTTGGCTAAGGGACAAAT
TCAAATTGGGGATTTGGTAGCCTTTATCGAGTATAGTTTTCATGCCCTTTTTTCGTTTTTGATGTTTGCTAATCTCTTTA
CCATGTATCCTAAAATGGCAGTTTCCAGCAAACGGATCAAAGAAGTCATGGACATGCCAATCTCTATTTCTAAAAATGAA
GATGGGGTAACAGAGACCTTGACAAGAGGTTACCTCGAATTTGACAATGTCACCTTTGCCTATCCTGGAGAAACAGAAAG
TCCTGTTCTACATAACATTTCTTTTAAAACCAAGCCTGGGGAAACCATCGCTTTTATTGGCTCAACAGGGTCAGGAAAGT
CATCCTTGGTGAATTTAATTCCTCGATTTTACGACGTGACGTTTGGGAGAATCTTGGTCGATGGGGTAGATGTCAGAGAT
TATCGGTTAAAATCTCTTCGTGCTAAAATTGGTTTCATCCCACAAAAAGCTCTGCTATTTACAGGAACTATCGAAGACAA
TTTAAAATATGGTAAGGCAGATGCTAGCTATTGGGAATTAGATGAAGCTACGGATGTGTCTCAAGCTAGAGCATTTATTG
CTAGCCGCGAAAAAGGCTATCAGACTCATCTAGCAGAAGCAGGAAGCAATTTATCAGGTGGTCAGAAACAACGGCTATCG
ATTGCCCGTGCGGTTGTTAAAAAACCCGATATTTATATCTTTGATGATTCTTTTTCGGCACTGGATTACCAAACCGATGC
TGCTTTAAGGAAGCGCCTGAAAGAAGTAACAGAGGAAGCGACTGTTTTGATTGTAGCTCAACGGGTTGGGACTATCATGG
ATGCCGATCAAATCATCGTTCTAGATCAAGGTGAAATTGTCGGTCGAGGCAAGCATGAGGAATTGATGGCAACCAATGCT
ATTTACCGTGAAATTGCTGATTCGCAATTAAACAAAGGAAATCTCATGGAAGAGGAGGTGGACTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(26-280)

ABC transporter (ABC_tran)

(350-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.962

91.738

0.367