Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   FGL06_RS08030 Genome accession   NZ_LR594042
Coordinates   1612833..1615169 (-) Length   778 a.a.
NCBI ID   WP_094140066.1    Uniprot ID   -
Organism   Streptococcus equinus strain NCTC8133     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1607833..1620169
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL06_RS08005 (NCTC8133_01622) - 1608268..1608765 (+) 498 WP_164554330.1 phosphatase PAP2 family protein -
  FGL06_RS08010 (NCTC8133_01623) nadC 1608836..1609696 (-) 861 WP_033153321.1 carboxylating nicotinate-nucleotide diphosphorylase -
  FGL06_RS08015 (NCTC8133_01624) - 1609725..1611029 (-) 1305 WP_126438103.1 L-aspartate oxidase -
  FGL06_RS08020 (NCTC8133_01625) nadA 1611283..1612203 (+) 921 WP_027968363.1 quinolinate synthase NadA -
  FGL06_RS08025 (NCTC8133_01626) - 1612278..1612577 (-) 300 WP_231997654.1 bacteriocin immunity protein -
  FGL06_RS08030 (NCTC8133_01627) mutS/mutS2 1612833..1615169 (-) 2337 WP_094140066.1 endonuclease MutS2 Machinery gene
  FGL06_RS08035 (NCTC8133_01628) - 1615278..1615826 (-) 549 WP_126438104.1 CvpA family protein -
  FGL06_RS08040 (NCTC8133_01629) - 1615832..1616140 (-) 309 WP_004233227.1 hypothetical protein -
  FGL06_RS08045 (NCTC8133_01630) rnhC 1616261..1617160 (+) 900 WP_126438105.1 ribonuclease HIII -
  FGL06_RS08050 (NCTC8133_01631) lepB 1617176..1617769 (+) 594 WP_126438106.1 signal peptidase I -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87679.03 Da        Isoelectric Point: 6.6163

>NTDB_id=1005404 FGL06_RS08030 WP_094140066.1 1612833..1615169(-) (mutS/mutS2) [Streptococcus equinus strain NCTC8133]
MNNRILEQLEFDKVKQLFAGYLQTEQGQEELRKLSPMTEPDRISRSFDEMSDMEQIFIEQHGFGLGSLRDISESMRRLEL
DADVNVSEIIDIKKILQVSAEVKHFYNDLENVELHALNNLFEKIELLPSLQGSLQAINDGGFIENFASHELDRIRRQINH
DESRVRQVLQDILKKQADHLTETLIASRNGRAVLPVKNSYRNRISGVVHDISASGSTVYIEPRAVVQLNEEITQLRADER
HEMARILRELSNMLRPHTNIIRNNAWVLGHLDFVRAKFLFMQENKAVVPQLSTDKTVQLLQARHPLLTNPVANDLHFLDE
LTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSKVAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVDILAAAD
KDSLVLVDELGAGTDPQEGASLAISILEHLRLTQVKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPG
RSNAFEIARRLGLAEVIVNEAERLTDSDTDVNRIIERLEEQTHESRKRLDHIKEVEQDNLKFNRAVKKLYNEFSHAKDKE
LEKASAKAQEIVDKAMAESEEILKNLHHKASLKPHEVIEAKSQLKKLAPEVDLSKNKVLKKAKKLRAPRVGDDIIVTAYG
QRGTLINQTKNGKWEAQVGLIKMTLKEDEFSLVKVQEEAQKPKKKQVHVVKKSKKSAGPRARLDLRGKRYEEAMQELDEF
IDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGCTIANLG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=1005404 FGL06_RS08030 WP_094140066.1 1612833..1615169(-) (mutS/mutS2) [Streptococcus equinus strain NCTC8133]
ATGAATAACAGAATTTTAGAACAGTTAGAATTTGATAAGGTCAAGCAACTTTTTGCTGGCTATTTACAAACTGAGCAGGG
GCAGGAGGAATTACGTAAACTTTCTCCAATGACTGAACCAGATCGTATCTCACGTTCATTTGATGAAATGTCTGATATGG
AGCAGATTTTCATTGAGCAACACGGATTTGGTCTTGGCAGTTTGCGTGATATTTCTGAAAGCATGCGTCGCTTAGAATTG
GATGCTGATGTTAACGTTTCAGAGATTATCGACATCAAAAAAATCTTGCAAGTTTCTGCAGAAGTTAAACATTTTTACAA
TGATTTAGAAAATGTCGAGCTGCATGCGCTCAATAATCTTTTTGAAAAAATCGAACTTCTACCAAGTCTGCAAGGTAGTC
TTCAAGCTATCAACGATGGCGGTTTTATTGAAAATTTTGCAAGTCATGAACTTGACCGTATTCGACGTCAAATCAATCAT
GATGAAAGCCGCGTGCGTCAAGTCTTGCAAGATATTTTGAAAAAGCAAGCTGACCATTTGACAGAGACTTTGATTGCAAG
TCGTAATGGTCGTGCAGTTTTACCTGTGAAAAATAGCTACCGCAATCGTATTTCAGGGGTTGTGCATGATATTTCAGCAT
CAGGAAGCACTGTTTATATTGAACCACGCGCCGTTGTCCAATTAAACGAAGAAATCACACAATTGCGCGCAGATGAACGT
CATGAAATGGCACGTATTTTGCGTGAGTTGTCAAATATGCTTCGTCCACATACTAATATTATTCGCAACAATGCTTGGGT
TCTAGGACACTTGGATTTTGTGCGTGCAAAATTCCTTTTCATGCAAGAAAACAAAGCAGTCGTTCCACAATTATCCACAG
ATAAGACCGTTCAGCTCTTACAAGCTCGTCATCCGCTGTTGACAAATCCAGTCGCAAATGACCTTCATTTCCTTGATGAA
TTGACCGTCATTGTCATCACTGGTCCAAATACTGGTGGTAAGACAGTTATGTTGAAAACTTTGGGATTAGCGCAGCTTAT
GGCACAATCAGGACTTCCAATCCTAGCTGACAAAGGTAGTAAAGTCGCTGTTTTCAATGAGATTTTCGCTGATATCGGTG
ATGAGCAATCTATCGAGCAAAGTTTGTCAACATTCTCAAGCCACATGACAAATATTGTGGATATCTTGGCAGCAGCTGAC
AAAGATAGTTTGGTACTTGTGGATGAATTGGGGGCAGGTACTGACCCGCAAGAAGGAGCTAGCCTTGCCATTTCAATCTT
GGAGCATTTGCGTTTGACACAAGTGAAAACCATGGCAACAACTCACTATCCTGAACTAAAAGCTTACGGTATCGAGACAG
AGTTTGTTGAAAATGCCAGCATGGAATTTGACACAGAGACTTTGAGCCCGACTTATCATTTCATGCAAGGTGTGCCAGGA
CGCTCAAATGCCTTTGAAATCGCTCGTCGTTTAGGTCTTGCAGAAGTGATTGTCAACGAAGCAGAGCGTTTGACGGATTC
TGATACGGACGTTAACCGCATCATCGAACGTTTGGAAGAACAAACGCATGAAAGTCGTAAACGTCTTGACCATATCAAAG
AAGTTGAACAAGATAACCTTAAATTCAATCGTGCAGTCAAGAAACTTTACAATGAATTCTCACATGCAAAAGACAAAGAA
CTTGAAAAAGCTTCTGCTAAGGCACAAGAAATTGTGGATAAAGCTATGGCTGAAAGTGAAGAAATCCTCAAAAATCTTCA
CCACAAAGCAAGCCTTAAACCACACGAAGTCATTGAAGCTAAAAGTCAGTTGAAAAAATTGGCACCTGAAGTTGATTTGT
CGAAAAATAAAGTTCTTAAGAAAGCTAAGAAATTGCGCGCACCGCGCGTGGGTGATGATATTATCGTCACAGCTTATGGT
CAACGCGGAACCTTGATTAATCAAACGAAAAACGGTAAATGGGAAGCGCAAGTTGGTCTCATTAAGATGACGCTTAAAGA
AGACGAATTTAGCCTTGTCAAAGTTCAAGAAGAAGCGCAAAAACCTAAGAAAAAACAAGTCCATGTGGTTAAGAAAAGCA
AGAAATCTGCTGGACCACGTGCCCGACTTGACCTTCGTGGTAAACGTTACGAAGAAGCCATGCAAGAATTGGATGAATTT
ATCGACCAAGCCTTGCTTAATAACATGGCGCAAGTTGATATCATTCACGGTATCGGAACAGGTGTTATCCGTGAAGGGGT
CACAAAATACCTTCGTCGCAACAAACATGTCAAATCATTCGGCTACGCCCCACAAAACGCAGGTGGCAGTGGCTGTACCA
TCGCAAATCTTGGTTAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)

MutS domain V (MutS_V)

(324-505)

Smr domain (Smr)

(703-776)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

41.772

100

0.424