Detailed information NTG1005075

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: FGL04_RS09500
• Genome accession: NZ_LR594035
• Coordinates: 1834867..1836138 (+)
• Length: 423 a.a.
• NCBI ID: WP_138068990.1
• Uniprot ID: -
• Organism: Streptococcus pseudoporcinus strain NCTC5385
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1829867..1841138

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL04_RS09485	-	1830306..1832284 (+)	1979	Protein_1846	amidase family protein	-
FGL04_RS09490 (NCTC5385_02061)	pabB	1832480..1834225 (+)	1746	WP_138068988.1	aminodeoxychorismate synthase component I	-
FGL04_RS09495 (NCTC5385_02062)	-	1834270..1834836 (+)	567	WP_138068989.1	aminodeoxychorismate/anthranilate synthase component II	-
FGL04_RS09500 (NCTC5385_02063)	rarA	1834867..1836138 (+)	1272	WP_138068990.1	replication-associated recombination protein A	Machinery gene
FGL04_RS09515 (NCTC5385_02066)	-	1836594..1836866 (-)	273	Protein_1850	tyrosine-type recombinase/integrase	-
FGL04_RS09520 (NCTC5385_02068)	-	1836936..1838041 (+)	1106	WP_138068165.1	IS3 family transposase	-
FGL04_RS09525	-	1838464..1838927 (+)	464	Protein_1852	transposase	-
FGL04_RS11130	-	1838946..1839155 (-)	210	Protein_1853	IS5/IS1182 family transposase	-
FGL04_RS09535 (NCTC5385_02071)	-	1839272..1839616 (-)	345	WP_138068991.1	hypothetical protein	-
FGL04_RS11135 (NCTC5385_02072)	-	1839626..1839934 (-)	309	WP_225247829.1	hypothetical protein	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 46535.98 Da
• Isoelectric Point: 6.8442

>NTDB_id=1005075 FGL04_RS09500 WP_138068990.1 1834867..1836138(+) (rarA) [Streptococcus pseudoporcinus strain NCTC5385]
MHDNLALRMRPKTISEVIGQEHLVGEGKIIRRMVEANMLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATTDTKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGNIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEAIKKAIA
TAISDKERGYSFEITLDNDALDFIATATNGDLRSAYNSLDLAVMSTKGDGTGKRHISLDTVENSLQRSYITMDKNGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLAVIAYEDIGLANPDAQIHTVTALDAAQKIGFPEARILIANVV
IELALSPKSNSAYLAMDAAISDLRKSGNLPIPRHLRDGHYSGSKDLGNAQDYLYPHAYPEKWVKQQYLPDKLINKDYFVA
NETGKYERALAANKERIDKLSQS

Nucleotide

• Length: 1272 bp

>NTDB_id=1005075 FGL04_RS09500 WP_138068990.1 1834867..1836138(+) (rarA) [Streptococcus pseudoporcinus strain NCTC5385]
ATGCACGATAATTTGGCGCTACGCATGCGTCCCAAAACCATTTCAGAAGTCATTGGACAAGAACACCTTGTCGGCGAAGG
TAAAATCATTCGTCGCATGGTTGAAGCTAATATGTTGTCATCTATGATTCTCTATGGTCCTCCCGGAATCGGTAAAACCT
CCATTGCTAGTGCGATTGCAGGTACAACCAAGTACGCCTTTCGCACCTTCAATGCTACCACCGATACCAAAAAAAGGCTC
CAAGAAATTGCCGAAGAAGCTAAGTTTTCAGGAGGGTTAGTTCTTCTTCTTGATGAGATTCATCGTCTTGATAAGACCAA
GCAGGACTTCCTCCTCCCCTTACTCGAAAATGGCAATATCATCATGATTGGAGCAACCACCGAAAATCCATTCTTTTCTG
TCACACCTGCTATTCGTAGTCGCGTTCAAATCTTTGAGTTAGAACCTTTAAGTAACGAAGCAATTAAAAAAGCTATCGCG
ACTGCTATCTCCGACAAAGAACGGGGATACTCCTTTGAGATCACACTAGATAACGATGCTCTTGACTTTATAGCAACAGC
GACAAATGGCGATTTACGTTCTGCCTATAATTCACTAGATTTAGCTGTCATGTCAACCAAGGGAGATGGCACGGGGAAAC
GCCATATTTCTCTAGATACAGTGGAAAATAGTTTACAGCGTAGTTATATCACCATGGATAAAAACGGAGATGGGCACTAT
GATGTGCTGTCAGCCCTACAAAAATCCATTCGTGGATCAGATGTCAATGCTAGTTTACACTATGCCGCTAGATTAGTTGA
AGCTGGAGACTTGCCCAGCCTGGCCAGACGCCTAGCTGTTATTGCTTATGAAGATATCGGCCTTGCCAACCCAGACGCAC
AAATTCACACCGTTACAGCACTGGATGCTGCCCAAAAGATTGGTTTTCCGGAAGCTAGGATCTTAATCGCCAACGTCGTT
ATCGAGCTTGCCTTATCACCCAAATCCAACTCAGCTTACCTTGCTATGGATGCTGCTATAAGTGATTTAAGAAAATCGGG
CAATCTTCCCATTCCAAGACATTTACGCGATGGCCACTATTCTGGCAGCAAAGATCTAGGAAATGCCCAAGACTACCTCT
ATCCTCATGCTTACCCCGAAAAATGGGTCAAACAACAATACCTACCAGACAAACTAATCAATAAGGACTATTTTGTAGCC
AATGAGACAGGAAAATATGAACGTGCTTTGGCAGCCAACAAAGAGCGGATTGACAAGCTCTCACAGTCCTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.233	98.582	0.584