Detailed information NTG1004868

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: FGK95_RS08775
• Genome accession: NZ_LR590625
• Coordinates: 1754498..1756930 (+)
• Length: 810 a.a.
• NCBI ID: WP_093999378.1
• Uniprot ID: -
• Organism: Streptococcus canis strain B700072
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1749498..1761930

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGK95_RS08750 (SAMEA5186854_01765)	-	1750494..1751696 (+)	1203	WP_093999516.1	IS110 family transposase	-
FGK95_RS08755 (SAMEA5186854_01766)	-	1751922..1752467 (-)	546	WP_003045194.1	CvpA family protein	-
FGK95_RS08760 (SAMEA5186854_01767)	-	1752470..1752778 (-)	309	WP_003045196.1	hypothetical protein	-
FGK95_RS08765 (SAMEA5186854_01768)	rnhC	1752925..1753833 (+)	909	WP_093999376.1	ribonuclease HIII	-
FGK95_RS08770 (SAMEA5186854_01769)	lepB	1753844..1754437 (+)	594	WP_093999377.1	signal peptidase I	-
FGK95_RS08775 (SAMEA5186854_01770)	recD/recD2/recDB	1754498..1756930 (+)	2433	WP_093999378.1	ATP-dependent RecD-like DNA helicase	Machinery gene
FGK95_RS08780 (SAMEA5186854_01771)	-	1757020..1757508 (+)	489	WP_093999379.1	hypothetical protein	-
FGK95_RS08785 (SAMEA5186854_01772)	dinB	1757600..1758694 (-)	1095	WP_138114301.1	DNA polymerase IV	-
FGK95_RS08790 (SAMEA5186854_01773)	pflB	1758903..1761230 (+)	2328	WP_003045209.1	formate C-acetyltransferase	-
FGK95_RS08795 (SAMEA5186854_01774)	-	1761353..1761793 (+)	441	WP_093999381.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 91104.84 Da
• Isoelectric Point: 4.9094

>NTDB_id=1004868 FGK95_RS08775 WP_093999378.1 1754498..1756930(+) (recD/recD2/recDB) [Streptococcus canis strain B700072]
MEYFFTGTVDRIIFENQANFFKILLLTIEDTDSDVDDIDIIITGTMADIMEGEDYTFWGELTQHPKYGQQVKLSRYQKMK
PNSSGLVTYFSSDHFKGIGKKTAEKIIALYGNNTIDHILEDPSKLESISSLSKVNRQAFVAKLKLNYGTEQIIAGLAELG
LSNRFAFQAFDQYKEEAIELIKENPYRLVEDLQGFGFKMADALAENLGIESDSPKRFRAALLHCLLEESINQGDTYVQAR
QLLSVTINLLEDARQVECHPAAVAQQLTSLIEEGNIKNIDTKLFDTSLYFAEEGIAKNIRRLLDQPLDSHLNSEAIQKEI
QALQDKFGITYDQVQQEAIEKALTSKVFLLTGGPGTGKTTVIRGILQAYAKLYQLDLDKKDLPILLAAPTGRAARRMNEL
TGLPSATIHRHLGLTGDNDYQTIEDYLDCDLLIVDEFSMVDTWLANQLLSAVSSTTQVIIVGDSDQLPSVGPGQVLADLL
KVKNLPQIALRKIFRQSQESTIVALADQMRRGILAPDFREKKADRSYFEAQAAFIPDMIQKIVLSAIKSGIPAEEIQILA
PMYKGQAGINHLNQLMQELLNPLEEQTEFLFNDTRFRKGDKVLHLVNDAQLNVFNGDIGYITDLIPAKYTESKQDELVIA
FDGSEVTYPRNEWLKLTLAYAMSIHKSQGSEFQVVILPITRQSGRLLQRNLIYTAITRSKSKLIMLGELAAFDYAIHNEG
IKRQTYLVERFQEQEPEEKTQTNQTQADLEKPANHLNGQVISRSKAHSTKASLTKQQQPLCVLTPDNFLTIDPMIGITED
DICHFFQKNP

Nucleotide

• Length: 2433 bp

>NTDB_id=1004868 FGK95_RS08775 WP_093999378.1 1754498..1756930(+) (recD/recD2/recDB) [Streptococcus canis strain B700072]
ATGGAATACTTTTTCACAGGTACTGTTGACCGTATTATCTTTGAAAACCAAGCTAATTTTTTCAAAATTCTTCTCCTTAC
AATCGAGGATACTGACAGTGATGTGGATGATATAGACATCATTATCACTGGAACCATGGCTGACATTATGGAAGGGGAAG
ATTATACCTTTTGGGGAGAATTAACCCAGCATCCTAAGTATGGTCAACAAGTCAAGCTGAGCCGTTATCAAAAAATGAAA
CCCAATTCCTCTGGTTTAGTGACTTATTTTTCTAGTGACCATTTCAAGGGGATTGGGAAAAAAACAGCTGAAAAGATTAT
TGCTCTCTATGGCAATAACACCATTGACCATATTTTAGAAGACCCCAGTAAACTGGAAAGCATTTCTAGCCTGTCCAAGG
TCAACCGCCAAGCCTTTGTTGCCAAACTCAAATTAAATTATGGTACCGAACAAATTATTGCTGGCTTAGCAGAGTTAGGC
TTAAGCAACCGTTTTGCCTTTCAAGCCTTTGACCAATACAAGGAAGAAGCCATTGAGCTGATTAAGGAAAATCCTTACCG
GCTAGTCGAAGACCTTCAAGGTTTTGGGTTTAAAATGGCTGATGCCCTAGCTGAAAACTTAGGAATTGAAAGCGACTCTC
CTAAACGTTTTCGGGCAGCTCTTTTGCATTGTCTCTTGGAAGAATCAATCAACCAAGGAGATACTTACGTTCAAGCACGC
CAATTACTATCTGTTACCATTAATCTCTTAGAAGATGCCCGTCAAGTAGAATGTCATCCAGCTGCTGTTGCCCAACAATT
AACCTCCTTGATTGAAGAGGGCAATATAAAAAATATTGACACCAAGCTTTTTGATACCAGCCTTTACTTTGCTGAGGAAG
GAATTGCCAAAAATATCAGAAGACTTTTAGACCAACCTCTGGACAGTCACCTTAACTCTGAGGCTATCCAGAAAGAAATT
CAAGCCCTTCAAGATAAATTCGGCATCACCTATGATCAGGTCCAACAAGAAGCTATTGAGAAGGCTTTGACCAGCAAAGT
ATTTCTACTAACAGGGGGACCAGGTACTGGAAAAACCACTGTTATTCGAGGAATCTTGCAAGCCTATGCCAAGCTTTACC
AGCTTGACCTTGACAAAAAAGATCTTCCTATTTTATTAGCAGCCCCAACAGGGCGAGCAGCTCGGCGGATGAATGAGCTG
ACCGGACTTCCTAGTGCTACTATCCATAGACACCTCGGTTTAACTGGCGATAATGACTATCAGACCATAGAAGACTATTT
GGATTGTGATTTGCTGATTGTGGATGAATTCTCCATGGTTGATACTTGGCTTGCCAATCAACTGCTATCTGCTGTCAGCT
CGACCACTCAGGTCATTATTGTGGGCGATAGTGACCAGCTGCCTTCTGTCGGCCCTGGGCAAGTGTTGGCAGATCTTTTA
AAGGTCAAAAATCTCCCACAAATTGCCCTAAGGAAAATCTTTCGCCAATCTCAAGAATCAACCATTGTAGCGTTGGCAGA
TCAGATGCGTCGTGGTATTTTAGCTCCAGATTTTAGAGAAAAAAAGGCTGATCGTTCTTATTTTGAAGCACAAGCAGCCT
TTATCCCTGACATGATTCAAAAAATTGTGCTTTCTGCTATCAAAAGCGGTATTCCTGCTGAAGAAATTCAAATTTTAGCC
CCTATGTATAAAGGACAGGCTGGCATCAATCATCTCAATCAACTAATGCAAGAGCTCCTCAATCCCTTAGAAGAGCAGAC
AGAATTTCTGTTCAACGACACCCGCTTCCGTAAGGGGGATAAGGTTTTGCACTTGGTCAATGATGCTCAACTCAATGTCT
TTAATGGCGATATTGGTTATATCACTGACTTGATTCCAGCCAAATACACTGAATCCAAGCAGGACGAATTAGTTATAGCA
TTTGACGGCAGCGAAGTAACTTATCCTCGAAATGAATGGCTTAAATTAACCCTTGCCTATGCCATGAGCATTCATAAGTC
GCAAGGTAGTGAATTTCAGGTTGTTATTTTGCCAATCACCCGTCAAAGTGGACGACTGCTGCAACGCAATCTTATTTACA
CAGCTATCACACGTTCCAAAAGCAAACTCATTATGCTAGGAGAATTGGCCGCTTTTGATTATGCCATTCACAATGAGGGC
ATCAAGCGACAAACTTATTTGGTGGAACGCTTCCAAGAGCAAGAACCTGAAGAAAAAACTCAGACCAACCAAACACAAGC
TGACCTCGAAAAACCTGCAAATCACTTAAATGGTCAAGTAATCAGTCGTTCAAAAGCACATTCAACCAAGGCTAGCCTGA
CTAAGCAACAGCAGCCCCTTTGTGTCTTAACTCCTGATAATTTTCTTACCATTGATCCGATGATAGGGATTACAGAAGAC
GACATCTGCCACTTTTTTCAGAAAAATCCCTAA

Domains

Predicted by InterProScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (572-641)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (659-705)

• AAA domain (AAA_30) (331-525)

• Helix-hairpin-helix containing domain (HHH_RecD2) (147-236)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	41.524	93.951	0.39