Detailed information NTG1002893

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABEF84_RS09475
• Genome accession: NZ_CP156795
• Coordinates: 1919422..1920054 (-)
• Length: 210 a.a.
• NCBI ID: WP_347473665.1
• Uniprot ID: -
• Organism: Acinetobacter thermotolerans strain ANC 7912
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1914422..1925054

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEF84_RS09445 (ABEF84_09445)	-	1914832..1915263 (-)	432	WP_034587663.1	SRPBCC family protein	-
ABEF84_RS09450 (ABEF84_09450)	tadA	1915315..1915836 (-)	522	WP_034587661.1	tRNA adenosine(34) deaminase TadA	-
ABEF84_RS09455 (ABEF84_09455)	-	1915840..1916964 (-)	1125	WP_347473664.1	enoyl-CoA hydratase/isomerase family protein	-
ABEF84_RS09460 (ABEF84_09460)	ung	1916961..1917677 (-)	717	WP_034587658.1	uracil-DNA glycosylase	-
ABEF84_RS09465 (ABEF84_09465)	-	1917723..1918319 (-)	597	WP_034587657.1	6-carboxytetrahydropterin synthase	-
ABEF84_RS09470 (ABEF84_09470)	gspK	1918465..1919412 (-)	948	WP_034587656.1	type II secretion system minor pseudopilin GspK	-
ABEF84_RS09475 (ABEF84_09475)	xcpW	1919422..1920054 (-)	633	WP_347473665.1	type II secretion system protein GspJ	Machinery gene
ABEF84_RS09480 (ABEF84_09480)	xcpV	1920051..1920464 (-)	414	WP_347473666.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABEF84_RS09485 (ABEF84_09485)	-	1920562..1921122 (-)	561	WP_347452848.1	type II secretion system protein	-
ABEF84_RS09490 (ABEF84_09490)	-	1921132..1921746 (-)	615	WP_034587650.1	TetR/AcrR family transcriptional regulator	-
ABEF84_RS09495 (ABEF84_09495)	-	1921790..1922563 (-)	774	WP_347452849.1	TatD family hydrolase	-
ABEF84_RS09500 (ABEF84_09500)	-	1922592..1922933 (-)	342	WP_034587646.1	PilZ domain-containing protein	-
ABEF84_RS09505 (ABEF84_09505)	-	1922949..1923935 (-)	987	WP_347473667.1	DNA polymerase III subunit delta'	-
ABEF84_RS09510 (ABEF84_09510)	kdsB	1923950..1924711 (-)	762	WP_347452851.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 210 a.a.
• Molecular weight: 24039.15 Da
• Isoelectric Point: 5.0272

>NTDB_id=1002893 ABEF84_RS09475 WP_347473665.1 1919422..1920054(-) (xcpW) [Acinetobacter thermotolerans strain ANC 7912]
MKKNGFTLVELLVAIAIFAILTALGWRVFDHVRVTRDQNTVHEQKLNQLQQGYQQILRDMVQTVPLTANFNGDIQPALVL
QNGQFNFSKTGVTDPLEQGIAPDERVEYQYRADEQKVYRLKYRNLNQTGRDQPESSVLISDVEQFQIIALNPNELSQWPE
SGLDLNKIENKQLLPKGIKINLMVQGGQYEWLFSLLNTDYLNNNNNTSSS

Nucleotide

• Length: 633 bp

>NTDB_id=1002893 ABEF84_RS09475 WP_347473665.1 1919422..1920054(-) (xcpW) [Acinetobacter thermotolerans strain ANC 7912]
ATGAAAAAGAACGGTTTTACTCTGGTTGAACTTCTTGTTGCGATTGCAATCTTTGCCATTCTGACGGCATTGGGCTGGCG
GGTCTTTGATCATGTAAGGGTGACACGGGATCAGAATACCGTTCATGAGCAAAAACTGAACCAGTTGCAGCAAGGCTATC
AGCAGATTCTGCGAGATATGGTGCAAACCGTACCATTAACCGCAAATTTTAATGGTGATATTCAGCCAGCCTTGGTATTG
CAGAATGGCCAATTTAATTTCAGTAAAACTGGTGTGACTGATCCACTGGAGCAGGGTATTGCCCCTGATGAGCGGGTAGA
ATATCAGTACCGTGCCGATGAGCAGAAAGTCTATCGATTAAAATATAGGAATTTGAACCAGACTGGACGTGATCAGCCAG
AATCCAGTGTGCTCATTAGTGATGTCGAGCAGTTCCAGATTATCGCACTCAATCCAAATGAATTAAGCCAATGGCCTGAA
AGCGGATTAGATTTAAATAAAATTGAAAACAAGCAACTGTTACCTAAAGGCATCAAGATTAATCTGATGGTGCAGGGGGG
GCAGTATGAGTGGCTGTTTAGCCTGCTGAATACTGATTATCTTAATAATAACAATAACACCAGCAGTTCTTAG

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (58-193)

• Prokaryotic N-terminal methylation motif (N_methyl) (2-24)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	55.67	92.381	0.514