Detailed information NTG0100277

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: AACH63_RS08595
• Genome accession: NZ_AP027240
• Coordinates: 1729301..1730236 (-)
• Length: 311 a.a.
• NCBI ID: WP_096369052.1
• Uniprot ID: -
• Organism: Lactococcus formosensis strain L21-20
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1724301..1735236

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AACH63_RS08570 (LG21E20_17190)	-	1724349..1725209 (-)	861	WP_096369055.1	S1 RNA-binding domain-containing protein	-
AACH63_RS08575 (LG21E20_17200)	frr	1725319..1725876 (-)	558	WP_017368646.1	ribosome recycling factor	-
AACH63_RS08580 (LG21E20_17210)	pyrH	1725905..1726621 (-)	717	WP_019292238.1	UMP kinase	-
AACH63_RS08585 (LG21E20_17220)	-	1726712..1727905 (-)	1194	WP_096369054.1	acetate kinase	-
AACH63_RS08590 (LG21E20_17230)	-	1728023..1729216 (-)	1194	WP_096369053.1	acetate kinase	-
AACH63_RS08595 (LG21E20_17240)	comYH	1729301..1730236 (-)	936	WP_096369052.1	class I SAM-dependent methyltransferase	Machinery gene
AACH63_RS08600 (LG21E20_17250)	-	1730282..1730512 (-)	231	WP_017368651.1	DUF3165 family protein	-
AACH63_RS08605 (LG21E20_17260)	typA	1730587..1732428 (-)	1842	WP_017368652.1	translational GTPase TypA	-
AACH63_RS08610 (LG21E20_17270)	-	1732748..1732960 (+)	213	WP_003133311.1	YqgQ family protein	-
AACH63_RS08615 (LG21E20_17280)	-	1732953..1733921 (+)	969	WP_017368653.1	ROK family glucokinase	-
AACH63_RS08620 (LG21E20_17290)	-	1733938..1734318 (+)	381	WP_017368654.1	rhodanese-like domain-containing protein	-
AACH63_RS08625 (LG21E20_17300)	-	1734358..1734804 (-)	447	WP_096369051.1	Dps family protein	-
AACH63_RS08630	-	1734915..1735070 (+)	156	WP_231951089.1	prepilin peptidase	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 34965.92 Da
• Isoelectric Point: 4.5506

>NTDB_id=100277 AACH63_RS08595 WP_096369052.1 1729301..1730236(-) (comYH) [Lactococcus formosensis strain L21-20]
MDIEKIEKAFGLVLENIMTIQAELMTDFYDAFVEQNAAYLGALELASLTKENNDKVRSMNLTKSEWQKLFQFVLLQGSRI
APMQANHNLTPDSIGFIFNFIIEELHKDRSIRVLEFGSGTGNLAETLLVHLQKEVDYVGFEVDDLLLDLSASMSEVMGTE
ASFLQMDAVKPQPLEAVDVALSDLPVGYYPDDEAASHFQVHDKSEHSYVHHLMIEQSFKYLKESGFALFLAPDNLLTSAQ
SEFLKAWIKEHAHIAAVITLPSSLFKGAGKSIYLLSKNQTNTPTFVYPLSDLADRSILQEFMSEFVKNVKI

Nucleotide

• Length: 936 bp

>NTDB_id=100277 AACH63_RS08595 WP_096369052.1 1729301..1730236(-) (comYH) [Lactococcus formosensis strain L21-20]
ATGGATATAGAGAAAATCGAAAAAGCTTTTGGGTTGGTCCTTGAGAATATCATGACAATTCAAGCAGAGCTGATGACGGA
TTTTTATGATGCTTTTGTGGAACAAAATGCAGCTTACTTAGGCGCCTTAGAGCTGGCGTCACTGACGAAGGAAAATAACG
ATAAAGTTCGTTCAATGAATCTTACGAAAAGTGAATGGCAAAAACTGTTTCAGTTTGTCTTGTTACAAGGCTCTCGTATT
GCACCGATGCAAGCAAATCATAATTTAACACCGGACTCTATTGGTTTTATCTTTAATTTCATCATTGAAGAGTTGCACAA
GGACCGATCGATTCGCGTGTTAGAGTTTGGTTCAGGAACGGGGAATTTAGCGGAAACGCTCTTGGTTCATCTGCAAAAAG
AAGTAGACTATGTTGGTTTTGAAGTAGACGACCTCTTGTTGGATTTATCTGCTTCAATGTCAGAAGTCATGGGAACAGAA
GCAAGTTTTCTCCAAATGGATGCTGTTAAACCTCAGCCCTTGGAAGCTGTGGACGTTGCCCTAAGTGATCTCCCAGTTGG
TTATTATCCAGACGATGAAGCTGCTAGCCATTTTCAAGTACATGACAAATCAGAACATAGCTATGTGCACCACTTAATGA
TCGAGCAATCCTTCAAGTATTTGAAAGAGAGTGGCTTTGCACTTTTCTTAGCTCCAGATAATCTTTTGACAAGTGCACAG
TCAGAGTTTTTGAAGGCCTGGATTAAAGAACATGCACATATTGCTGCAGTCATTACATTACCTTCATCCCTCTTTAAAGG
GGCAGGAAAATCGATTTATTTATTAAGTAAAAACCAGACAAATACACCGACTTTTGTTTACCCCTTATCTGACTTAGCAG
ACCGCTCTATTTTGCAAGAATTTATGTCTGAGTTTGTGAAAAATGTCAAGATTTGA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (199-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	49.677	99.678	0.495
comYH	Streptococcus mutans UA159	49.355	99.678	0.492