Detailed information NTG1002086

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: EL147_RS04630
• Genome accession: NZ_LR134341
• Coordinates: 978423..979694 (+)
• Length: 423 a.a.
• NCBI ID: WP_007895339.1
• Uniprot ID: G5KA97
• Organism: Streptococcus pseudoporcinus strain NCTC13786
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 973423..984694

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL147_RS04615 (NCTC13786_00926)	-	973862..975841 (+)	1980	WP_007895274.1	amidase family protein	-
EL147_RS04620 (NCTC13786_00927)	pabB	976036..977781 (+)	1746	WP_007895516.1	aminodeoxychorismate synthase component I	-
EL147_RS04625 (NCTC13786_00928)	-	977826..978392 (+)	567	WP_007895425.1	aminodeoxychorismate/anthranilate synthase component II	-
EL147_RS04630 (NCTC13786_00929)	rarA	978423..979694 (+)	1272	WP_007895339.1	replication-associated recombination protein A	Machinery gene
EL147_RS04645 (NCTC13786_00932)	-	980183..980650 (+)	468	Protein_890	transposase	-
EL147_RS04650 (NCTC13786_00933)	-	980669..980878 (-)	210	Protein_891	IS5/IS1182 family transposase	-
EL147_RS04655 (NCTC13786_00934)	-	980995..981321 (-)	327	WP_037598899.1	hypothetical protein	-
EL147_RS04660 (NCTC13786_00935)	-	981331..981936 (-)	606	WP_007895541.1	hypothetical protein	-
EL147_RS04670 (NCTC13786_00937)	-	983084..983422 (-)	339	WP_007895422.1	hypothetical protein	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 46654.11 Da
• Isoelectric Point: 6.8443

>NTDB_id=1002086 EL147_RS04630 WP_007895339.1 978423..979694(+) (rarA) [Streptococcus pseudoporcinus strain NCTC13786]
MHDNLALRMRPKTISEVIGQEHLVGEGKIIRRMVEANMLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATTDTKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGNIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEAIKKAIA
TAISDKERGYSFEITLDSDALDFIATATNGDLRSAYNSLDLAVMSTKEDSTGKRHISLDTVENSLQRSYITMDKNGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTVIAYEDIGLANPDAQIHTVTALDAAQKIGFPEARILIANVV
IELALSPKSNSAYLAMDAAISDLRKSGNLPIPRHLRDGHYSGSKDLGNAQDYLYPHAYPEKWVKQQYLPDKLINKNYFIA
NETGKYERALAANKERIDKLSQS

Nucleotide

• Length: 1272 bp

>NTDB_id=1002086 EL147_RS04630 WP_007895339.1 978423..979694(+) (rarA) [Streptococcus pseudoporcinus strain NCTC13786]
ATGCACGATAATTTGGCGCTACGCATGCGTCCCAAAACCATTTCAGAAGTCATCGGACAAGAGCACCTTGTCGGCGAAGG
TAAAATCATTCGTCGCATGGTTGAAGCTAATATGTTGTCATCTATGATTCTCTATGGTCCTCCCGGAATCGGTAAAACCT
CCATTGCTAGTGCGATTGCAGGTACAACCAAGTACGCCTTTCGCACCTTCAATGCTACCACCGATACCAAAAAAAGGCTC
CAAGAAATTGCCGAAGAAGCTAAGTTTTCAGGAGGGTTAGTTCTTCTTCTTGATGAGATTCATCGTCTTGATAAGACCAA
GCAGGACTTCCTCCTCCCCTTACTCGAAAATGGCAATATCATCATGATTGGAGCAACCACCGAAAATCCATTCTTTTCTG
TCACACCTGCTATTCGTAGTCGCGTTCAAATCTTTGAGTTAGAACCTTTAAGTAACGAAGCAATTAAAAAAGCTATCGCG
ACTGCTATCTCCGACAAAGAACGGGGATACTCCTTTGAGATCACACTAGATAGCGATGCTCTTGACTTTATAGCAACAGC
GACAAATGGCGATTTACGTTCTGCCTATAATTCACTAGATTTAGCCGTCATGTCAACCAAGGAAGATAGCACGGGGAAAC
GCCATATTTCTCTAGATACAGTGGAAAATAGTTTACAGCGTAGTTATATCACCATGGATAAAAACGGAGATGGGCACTAT
GATGTGCTGTCAGCCCTACAAAAATCCATTCGTGGCTCAGATGTCAATGCTAGTTTACACTATGCCGCTAGATTAGTTGA
AGCTGGAGACTTGCCCAGCCTGGCCAGACGCCTAACTGTTATTGCTTATGAAGATATCGGCCTTGCCAACCCAGACGCAC
AAATTCACACCGTTACAGCACTGGATGCTGCCCAAAAGATTGGTTTTCCGGAAGCTAGGATCTTAATCGCCAACGTCGTT
ATCGAGCTTGCCTTATCACCCAAATCCAACTCAGCTTACCTTGCTATGGATGCTGCTATAAGTGATTTAAGAAAATCGGG
CAATCTTCCCATTCCAAGACATTTGCGCGATGGCCACTATTCTGGCAGCAAAGATCTAGGAAATGCCCAAGACTACCTCT
ATCCTCATGCTTACCCCGAAAAATGGGTCAAACAACAATACCTACCAGACAAACTAATCAATAAGAACTATTTTATAGCC
AACGAGACAGGAAAATATGAACGTGCTTTGGCAGCCAACAAAGAGCGGATTGACAAGCTCTCACAGTCCTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

3D structure

• AlphaFold DB: G5KA97

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.472	98.582	0.586