Detailed information NTG1001733

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: EL144_RS03435
• Genome accession: NZ_LR134327
• Coordinates: 686105..687427 (-)
• Length: 440 a.a.
• NCBI ID: WP_005703537.1
• Uniprot ID: -
• Organism: Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 681105..692427

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL144_RS03425 (NCTC5906_00691)	serS	682408..683715 (-)	1308	WP_065336509.1	serine--tRNA ligase	-
EL144_RS03430 (NCTC5906_00692)	-	684015..685682 (+)	1668	WP_005703539.1	anaerobic C4-dicarboxylate transporter	-
EL144_RS03435 (NCTC5906_00693)	rarA	686105..687427 (-)	1323	WP_005703537.1	replication-associated recombination protein A	Machinery gene
EL144_RS03440 (NCTC5906_00694)	lolA	687440..688057 (-)	618	WP_005703536.1	outer membrane lipoprotein chaperone LolA	-
EL144_RS03445 (NCTC5906_00695)	-	688168..690924 (-)	2757	WP_005703535.1	DNA translocase FtsK	-
EL144_RS03450 (NCTC5906_00696)	lrp	690942..691421 (-)	480	WP_005702602.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 440 a.a.
• Molecular weight: 49055.89 Da
• Isoelectric Point: 5.7541

>NTDB_id=1001733 EL144_RS03435 WP_005703537.1 686105..687427(-) (rarA) [Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906]
MSNFSFDFNENDFRPLAARMRPTTLAQYCGQSHLLGEGKPLRKAIEAGYVHSMIFWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIEKAKQNKLAGLRTILFVDEVHRFNKSQQDAFLPHIEDGTIIFIGATTENPSFELNNALLSRARVY
ILKPLSTQEIERVLQQAIDDQENGLGKVRLDLQENLLSLLAEYVNGDARLALNCLEMMVDMAAESKNGKILDRTLLTEVL
GERQARFDKQGDRFYDFISALHKSIRGSAPDAALYWYARIITAGGDPLYVARRLLAIASEDVGNADPRAMQVAIAAWDCF
TRVGAAEGERAIAQAIVYLAVAPKSNAVYLAFKAAKKLATESADFDVPEHLRNAPTNLMKDLGFGAEYRYAHDEPNAYAA
GENYFPPQLKDTQFYFPTTRGMEIKIKEKLEWLKGLDQES

Nucleotide

• Length: 1323 bp

>NTDB_id=1001733 EL144_RS03435 WP_005703537.1 686105..687427(-) (rarA) [Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906]
ATGTCCAACTTCAGCTTTGATTTTAACGAAAATGATTTCCGCCCACTCGCCGCAAGAATGCGTCCAACTACATTGGCGCA
ATATTGCGGTCAGTCGCATTTATTGGGTGAAGGCAAACCGTTACGCAAAGCCATTGAGGCGGGATACGTCCATTCCATGA
TTTTCTGGGGGCCGCCAGGCACCGGAAAAACCACTTTGGCAGAGATTATCGCTCAACGCATTAACGCTGAAGTCGAGCGA
ATTTCTGCCGTCACCAGTGGCATTAAAGAAATTCGTGAAGCCATTGAAAAAGCCAAACAAAACAAATTGGCGGGTCTGCG
CACCATTTTGTTTGTGGACGAAGTTCACCGTTTCAACAAAAGCCAGCAAGACGCGTTTCTGCCACATATCGAAGACGGCA
CCATTATTTTTATTGGTGCCACCACGGAAAATCCTTCTTTTGAATTAAATAACGCGCTACTTTCCCGCGCACGGGTTTAT
ATTCTCAAACCGCTTTCTACGCAGGAAATTGAACGCGTTTTGCAACAAGCGATCGACGATCAGGAAAATGGCTTGGGCAA
AGTACGGTTAGATTTGCAGGAGAATTTGTTGTCGCTTTTGGCAGAATACGTCAACGGCGATGCACGCCTTGCGTTGAACT
GTTTGGAAATGATGGTGGACATGGCCGCTGAATCCAAAAACGGCAAAATTTTAGACCGCACTTTACTTACGGAAGTGTTG
GGCGAACGGCAGGCGCGTTTTGATAAACAAGGCGATCGTTTCTACGATTTCATTTCCGCGCTACATAAATCCATTCGCGG
ATCCGCACCGGATGCGGCGCTCTATTGGTATGCCCGCATTATCACTGCCGGCGGTGATCCGCTTTACGTGGCTCGCCGTT
TATTGGCGATTGCCTCGGAAGATGTGGGTAATGCCGATCCGCGTGCGATGCAGGTTGCCATTGCTGCATGGGATTGTTTT
ACCCGTGTCGGTGCCGCCGAAGGCGAACGCGCCATTGCGCAAGCTATTGTCTATTTAGCCGTTGCGCCAAAAAGCAACGC
TGTTTACCTCGCCTTCAAAGCAGCGAAAAAACTGGCGACTGAATCTGCTGATTTTGATGTGCCGGAACACCTCCGCAACG
CCCCAACCAATCTCATGAAAGACCTCGGCTTCGGTGCCGAATACCGCTACGCCCACGACGAACCCAACGCCTACGCCGCC
GGCGAAAACTACTTCCCGCCACAACTCAAAGACACCCAATTTTATTTCCCTACTACAAGAGGCATGGAGATTAAGATTAA
GGAAAAGTTGGAGTGGTTAAAAGGGCTAGATCAGGAAAGTTAG

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (189-266)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• ATPase family associated with various cellular activities (AAA) (AAA) (53-163)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.416	93.409	0.368