Detailed information NTG1000067

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: EL070_RS09165
• Genome accession: NZ_LR134284
• Coordinates: 1728126..1729394 (+)
• Length: 422 a.a.
• NCBI ID: WP_111705810.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC8232
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1723126..1734394

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL070_RS09140 (NCTC8232_01834)	-	1723294..1724043 (-)	750	WP_011185001.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	-
EL070_RS09145 (NCTC8232_01835)	prmA	1724043..1724996 (-)	954	WP_038433725.1	50S ribosomal protein L11 methyltransferase	-
EL070_RS09150 (NCTC8232_01836)	-	1725067..1725537 (-)	471	WP_038433726.1	DUF3013 family protein	-
EL070_RS09155 (NCTC8232_01837)	pabB	1725737..1727494 (+)	1758	WP_111705891.1	aminodeoxychorismate synthase component I	-
EL070_RS09160 (NCTC8232_01838)	-	1727527..1728093 (+)	567	WP_021733904.1	aminodeoxychorismate/anthranilate synthase component II	-
EL070_RS09165 (NCTC8232_01839)	rarA	1728126..1729394 (+)	1269	WP_111705810.1	replication-associated recombination protein A	Machinery gene
EL070_RS09180 (NCTC8232_01842)	smeZ	1729967..1730686 (+)	720	WP_038433728.1	streptococcal mitogenic exotoxin SmeZ	-
EL070_RS09190 (NCTC8232_01843)	-	1731397..1733025 (+)	1629	WP_002982527.1	ABC transporter substrate-binding protein	-
EL070_RS09195 (NCTC8232_01844)	-	1733138..1734115 (+)	978	WP_126405175.1	ABC transporter permease	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46675.09 Da
• Isoelectric Point: 6.3774

>NTDB_id=1000067 EL070_RS09165 WP_111705810.1 1728126..1729394(+) (rarA) [Streptococcus pyogenes strain NCTC8232]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEETKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDSSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLSD

Nucleotide

• Length: 1269 bp

>NTDB_id=1000067 EL070_RS09165 WP_111705810.1 1728126..1729394(+) (rarA) [Streptococcus pyogenes strain NCTC8232]
ATGCCTGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTTCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAACTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGACAAA
ACAAGATTTTCTTTTACCCTTACTTGAGAACGGCACCATTATCATGATTGGCGCAACCACTGAGAATCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATAGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTTTTATCTGCCTTACAAAAATCCATTAGAGGTTCTGATGTCAATGCTAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCACCTAAATCCAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTATGCTGGCAGTAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTCAGACTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (174-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (9-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.472	98.815	0.588