NT genes of 'Avibacterium paragallinarum strain ADL-AP15'


In this species, transformation by exogenous DNA is regulated by the presence of a specific Uptake Signal Sequence (USS) (PMID: 17038178).
Evidence:

Gene name Gene type Function Related MGE Organism Genome accession Locus tag Protein ID
insolico comE1/comEA Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain ADL-AP15 NZ_CP051638 HHJ60_RS00915 WP_035685388.1
insolico ssb Machinery gene DNA processing Prophage Avibacterium paragallinarum strain ADL-AP15 NZ_CP051638 HHJ60_RS01295 WP_035689249.1
insolico ssb Machinery gene DNA processing Prophage Avibacterium paragallinarum strain ADL-AP15 NZ_CP051638 HHJ60_RS01540 WP_035688057.1
insolico comE Machinery gene DNA binding and uptake Genomic island Avibacterium paragallinarum strain ADL-AP15 NZ_CP051638 HHJ60_RS01670 WP_035688106.1
insolico ssb Machinery gene DNA processing - Avibacterium paragallinarum strain ADL-AP15 NZ_CP051638 HHJ60_RS02120 WP_035687806.1
insolico rec2 Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain ADL-AP15 NZ_CP051638 HHJ60_RS06055 WP_081637512.1
insolico ssb Machinery gene DNA processing Prophage Avibacterium paragallinarum strain ADL-AP15 NZ_CP051638 HHJ60_RS06990 WP_035689249.1
insolico pilC Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain ADL-AP15 NZ_CP051638 HHJ60_RS07645 WP_081637525.1
insolico pilB Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain ADL-AP15 NZ_CP051638 HHJ60_RS07815 WP_035687022.1
insolico pilA Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain ADL-AP15 NZ_CP051638 HHJ60_RS07820 WP_035687024.1
insolico dprA Machinery gene DNA processing - Avibacterium paragallinarum strain ADL-AP15 NZ_CP051638 HHJ60_RS08605 WP_035687998.1
insolico comN Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain ADL-AP15 NZ_CP051638 HHJ60_RS08790 WP_017806950.1
insolico comM Machinery gene Involve in natural transformation - Avibacterium paragallinarum strain ADL-AP15 NZ_CP051638 HHJ60_RS09600 WP_035686457.1
insolico recA Machinery gene Homologous recombination IS/Tn Avibacterium paragallinarum strain ADL-AP15 NZ_CP051638 HHJ60_RS11120 WP_035687924.1

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    experimental Experimentally validated     insolico Bioinformatically predicted