ICE family: 10270-RD.2 | ||||
We selected 10270-RD.2 as a reference and defined 10270-RD.2 family. We calssified ICE that has significant sequence alignment and syntenic 'core' structure with 10270-RD.2 into this family. | ||||
# | ID | ICE name | Strain | Replicon |
1 | 187 | 6180-RD.2 | Streptococcus pyogenes MGAS6180 | NC_007296 |
2 | 191 | 10270-RD.2 | Streptococcus pyogenes MGAS10270 | NC_008022 |
Putative ICEs predicted by bioinformatic methods |
Element | No. of sequences | Download | Alignment |
Proteins | 70 | Fasta | Multiple protein sequence alignment by MUSCLE online |
ICEs | 2 | Fasta | Nucleotide sequence comparison by webACT |
(1) Sitkiewicz I et al. (2011). Lateral gene transfer of streptococcal ICE element RD2 (region of difference 2) encoding secreted proteins. BMC Microbiol. 0.503472222. [PudMed:21457552] |
(2) Beres SB et al. (2007). Contribution of exogenous genetic elements to the group A Streptococcus metagenome. PLoS One. 2(8):e800. [PudMed:17726530] |
experimental literature |