T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 21596..56040
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OKD03_RS00105 (OKD03_00095) | 17660..18097 | + | 438 | WP_022649971 | type IV pilus biogenesis protein PilM | - |
| OKD03_RS00110 (OKD03_00100) | 18112..19788 | + | 1677 | WP_022649972 | PilN family type IVB pilus formation outer membrane protein | - |
| OKD03_RS00115 (OKD03_00105) | 19790..21094 | + | 1305 | WP_022649973 | type 4b pilus protein PilO2 | - |
| OKD03_RS00120 (OKD03_00110) | 21078..21593 | + | 516 | WP_022649974 | type IV pilus biogenesis protein PilP | - |
| OKD03_RS00125 (OKD03_00115) | 21596..23155 | + | 1560 | WP_022649975 | GspE/PulE family protein | virB11 |
| OKD03_RS00130 (OKD03_00120) | 23148..24242 | + | 1095 | WP_032623575 | type II secretion system F family protein | - |
| OKD03_RS00135 (OKD03_00125) | 24256..24870 | + | 615 | WP_022649977 | type 4 pilus major pilin | - |
| OKD03_RS00140 (OKD03_00130) | 24955..25437 | + | 483 | WP_045261878 | lytic transglycosylase domain-containing protein | virB1 |
| OKD03_RS00145 (OKD03_00135) | 25422..26096 | + | 675 | WP_022649979 | prepilin peptidase | - |
| OKD03_RS00150 (OKD03_00140) | 26093..27430 | + | 1338 | WP_022649980 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| OKD03_RS00155 (OKD03_00145) | 28008..29168 | + | 1161 | WP_265937802 | site-specific integrase | - |
| OKD03_RS00160 (OKD03_00150) | 29245..29664 | + | 420 | WP_071785236 | hypothetical protein | - |
| OKD03_RS00165 (OKD03_00155) | 29811..30647 | + | 837 | WP_022649983 | hypothetical protein | traE |
| OKD03_RS00170 (OKD03_00160) | 30753..31958 | + | 1206 | WP_022649984 | conjugal transfer protein TraF | - |
| OKD03_RS00175 (OKD03_00165) | 32067..32483 | + | 417 | WP_123839394 | hypothetical protein | - |
| OKD03_RS00180 (OKD03_00170) | 32554..33027 | + | 474 | WP_022649985 | DotD/TraH family lipoprotein | - |
| OKD03_RS00185 (OKD03_00175) | 33024..33830 | + | 807 | WP_022649986 | type IV secretory system conjugative DNA transfer family protein | traI |
| OKD03_RS00190 (OKD03_00180) | 33843..35003 | + | 1161 | WP_022649987 | plasmid transfer ATPase TraJ | virB11 |
| OKD03_RS00195 (OKD03_00185) | 35000..35287 | + | 288 | WP_022649988 | hypothetical protein | traK |
| OKD03_RS00200 (OKD03_00190) | 35359..38901 | + | 3543 | WP_032635082 | LPD7 domain-containing protein | - |
| OKD03_RS00205 (OKD03_00195) | 38931..39269 | + | 339 | WP_086626045 | conjugal transfer protein | traL |
| OKD03_RS00210 (OKD03_00200) | 39275..39976 | + | 702 | WP_022649991 | DotI/IcmL family type IV secretion protein | traM |
| OKD03_RS00215 (OKD03_00205) | 39987..40967 | + | 981 | WP_022649992 | DotH/IcmK family type IV secretion protein | traN |
| OKD03_RS00220 (OKD03_00210) | 40967..42274 | + | 1308 | WP_022649993 | conjugal transfer protein TraO | traO |
| OKD03_RS00225 (OKD03_00215) | 42255..43028 | + | 774 | WP_123839398 | conjugal transfer protein TraP | traP |
| OKD03_RS00230 (OKD03_00220) | 43028..43552 | + | 525 | WP_022649995 | conjugal transfer protein TraQ | traQ |
| OKD03_RS00235 (OKD03_00225) | 43587..43991 | + | 405 | WP_022649996 | DUF6750 family protein | traR |
| OKD03_RS00240 (OKD03_00230) | 44175..44900 | + | 726 | WP_063864836 | hypothetical protein | traT |
| OKD03_RS00245 (OKD03_00235) | 44987..48040 | + | 3054 | WP_022649998 | hypothetical protein | traU |
| OKD03_RS00250 (OKD03_00240) | 48040..48609 | + | 570 | WP_022649999 | hypothetical protein | traV |
| OKD03_RS00255 (OKD03_00245) | 48622..49824 | + | 1203 | WP_022650000 | conjugal transfer protein TraW | traW |
| OKD03_RS00260 (OKD03_00250) | 49821..50363 | + | 543 | WP_022650001 | conjugal transfer protein TraX | - |
| OKD03_RS00265 (OKD03_00255) | 50421..52580 | + | 2160 | WP_022650002 | DotA/TraY family protein | traY |
| OKD03_RS00270 (OKD03_00260) | 52642..53274 | + | 633 | WP_022650003 | plasmid IncI1-type surface exclusion protein ExcA | - |
| OKD03_RS00275 (OKD03_00265) | 53595..54803 | + | 1209 | WP_022650004 | hypothetical protein | trbA |
| OKD03_RS00280 (OKD03_00270) | 54784..56040 | + | 1257 | WP_126530067 | hypothetical protein | trbB |
| OKD03_RS00285 (OKD03_00275) | 56044..58344 | + | 2301 | WP_022650006 | F-type conjugative transfer protein TrbC | - |
| OKD03_RS00290 (OKD03_00280) | 58418..58687 | + | 270 | WP_022650007 | hypothetical protein | - |