T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 106147..131955
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D4N21_RS29925 (D4N21_30070) | 106147..108456 | - | 2310 | WP_128206236 | type IV conjugative transfer system coupling protein TraD | virb4 |
| D4N21_RS29930 (D4N21_30075) | 108818..109549 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| D4N21_RS29935 (D4N21_30080) | 109739..110269 | - | 531 | WP_128206265 | conjugal transfer protein TraS | - |
| D4N21_RS29940 (D4N21_30085) | 110272..113121 | - | 2850 | WP_128206237 | conjugal transfer mating-pair stabilization protein TraG | traG |
| D4N21_RS29945 (D4N21_30090) | 113121..114500 | - | 1380 | WP_164875722 | conjugal transfer pilus assembly protein TraH | traH |
| D4N21_RS29950 (D4N21_30095) | 114478..114921 | - | 444 | WP_023158001 | F-type conjugal transfer protein TrbF | - |
| D4N21_RS29955 (D4N21_30100) | 114967..115524 | - | 558 | WP_032441889 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| D4N21_RS29960 (D4N21_30105) | 115496..115735 | - | 240 | WP_009309875 | type-F conjugative transfer system pilin chaperone TraQ | - |
| D4N21_RS29965 (D4N21_30110) | 115746..116498 | - | 753 | WP_114435907 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| D4N21_RS29970 (D4N21_30115) | 116519..116845 | - | 327 | WP_016529362 | hypothetical protein | - |
| D4N21_RS31970 (D4N21_30120) | 116891..117076 | - | 186 | WP_042922350 | hypothetical protein | - |
| D4N21_RS29980 (D4N21_30125) | 117073..117309 | - | 237 | WP_042922352 | conjugal transfer protein TrbE | - |
| D4N21_RS29985 (D4N21_30130) | 117341..119296 | - | 1956 | WP_114435906 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| D4N21_RS29990 (D4N21_30135) | 119355..119993 | - | 639 | WP_046622838 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| D4N21_RS29995 (D4N21_30140) | 120006..120995 | - | 990 | WP_128206238 | conjugal transfer pilus assembly protein TraU | traU |
| D4N21_RS30000 (D4N21_30145) | 120992..121381 | - | 390 | WP_128206239 | hypothetical protein | - |
| D4N21_RS30005 (D4N21_30150) | 121423..122049 | - | 627 | WP_032445234 | type-F conjugative transfer system protein TraW | traW |
| D4N21_RS30010 (D4N21_30155) | 122049..122438 | - | 390 | WP_004152591 | type-F conjugative transfer system protein TrbI | - |
| D4N21_RS30015 (D4N21_30160) | 122438..125077 | - | 2640 | WP_128206240 | type IV secretion system protein TraC | virb4 |
| D4N21_RS30020 (D4N21_30165) | 125149..125547 | - | 399 | WP_164875723 | hypothetical protein | - |
| D4N21_RS30025 (D4N21_30170) | 125555..125869 | - | 315 | WP_228258590 | hypothetical protein | - |
| D4N21_RS30030 (D4N21_30175) | 125973..126263 | - | 291 | WP_128206242 | hypothetical protein | - |
| D4N21_RS30035 (D4N21_30180) | 126260..126664 | - | 405 | WP_128206243 | hypothetical protein | - |
| D4N21_RS30040 (D4N21_30185) | 126731..127048 | - | 318 | WP_023320103 | hypothetical protein | - |
| D4N21_RS30045 (D4N21_30190) | 127049..127267 | - | 219 | WP_004171484 | hypothetical protein | - |
| D4N21_RS30050 (D4N21_30195) | 127291..127581 | - | 291 | WP_048993668 | hypothetical protein | - |
| D4N21_RS30055 (D4N21_30200) | 127586..127996 | - | 411 | WP_128206244 | hypothetical protein | - |
| D4N21_RS30060 (D4N21_30205) | 128128..128712 | - | 585 | WP_114502744 | type IV conjugative transfer system lipoprotein TraV | traV |
| D4N21_RS30065 (D4N21_30210) | 128731..128916 | - | 186 | WP_038990989 | hypothetical protein | - |
| D4N21_RS30070 (D4N21_30215) | 128913..130337 | - | 1425 | WP_128206245 | F-type conjugal transfer pilus assembly protein TraB | traB |
| D4N21_RS30075 (D4N21_30220) | 130337..131077 | - | 741 | WP_128206246 | type-F conjugative transfer system secretin TraK | traK |
| D4N21_RS30080 (D4N21_30225) | 131064..131630 | - | 567 | WP_020316627 | type IV conjugative transfer system protein TraE | traE |
| D4N21_RS30085 (D4N21_30230) | 131650..131955 | - | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| D4N21_RS30090 (D4N21_30235) | 131969..132337 | - | 369 | WP_020316649 | type IV conjugative transfer system pilin TraA | - |
| D4N21_RS30095 (D4N21_30240) | 132406..132606 | - | 201 | WP_048289787 | TraY domain-containing protein | - |
| D4N21_RS31805 | 132692..133393 | - | 702 | WP_228258591 | hypothetical protein | - |
| D4N21_RS30105 (D4N21_30250) | 133631..134023 | - | 393 | WP_020805752 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| D4N21_RS30110 (D4N21_30255) | 134527..134934 | + | 408 | WP_223170089 | transglycosylase SLT domain-containing protein | - |
| D4N21_RS30115 (D4N21_30260) | 134972..135502 | - | 531 | WP_128206247 | antirestriction protein | - |