T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 82847..111524
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRN13_RS28620 (CRN13_28470) | 78855..79211 | + | 357 | WP_064161369 | hypothetical protein | - |
| CRN13_RS28625 (CRN13_28475) | 79272..79484 | + | 213 | WP_019706020 | hypothetical protein | - |
| CRN13_RS28630 (CRN13_28480) | 79495..79719 | + | 225 | WP_014343499 | hypothetical protein | - |
| CRN13_RS28635 (CRN13_28485) | 79800..80120 | + | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CRN13_RS28640 (CRN13_28490) | 80110..80388 | + | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| CRN13_RS28645 (CRN13_28495) | 80389..80802 | + | 414 | WP_064161368 | type II toxin-antitoxin system HigA family antitoxin | - |
| CRN13_RS28660 (CRN13_28520) | 81631..82452 | + | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| CRN13_RS28665 (CRN13_28525) | 82485..82814 | + | 330 | WP_011977736 | DUF5983 family protein | - |
| CRN13_RS28670 (CRN13_28530) | 82847..83332 | - | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| CRN13_RS28675 (CRN13_28535) | 83723..84139 | + | 417 | WP_014343494 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CRN13_RS28680 (CRN13_28540) | 84339..85076 | + | 738 | WP_013214018 | conjugal transfer protein TrbJ | - |
| CRN13_RS28685 (CRN13_28545) | 85191..85397 | + | 207 | WP_171773970 | TraY domain-containing protein | - |
| CRN13_RS28690 (CRN13_28550) | 85459..85827 | + | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| CRN13_RS28695 (CRN13_28555) | 85841..86146 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| CRN13_RS28700 (CRN13_28560) | 86166..86732 | + | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| CRN13_RS28705 (CRN13_28565) | 86719..87459 | + | 741 | WP_064161334 | type-F conjugative transfer system secretin TraK | traK |
| CRN13_RS28710 (CRN13_28570) | 87459..88883 | + | 1425 | WP_004233801 | F-type conjugal transfer pilus assembly protein TraB | traB |
| CRN13_RS28715 (CRN13_28575) | 88955..89539 | + | 585 | WP_023287136 | type IV conjugative transfer system lipoprotein TraV | traV |
| CRN13_RS28720 (CRN13_28580) | 89862..90080 | + | 219 | WP_004195468 | hypothetical protein | - |
| CRN13_RS28725 (CRN13_28585) | 90081..90392 | + | 312 | WP_013214022 | hypothetical protein | - |
| CRN13_RS28730 (CRN13_28590) | 90459..90863 | + | 405 | WP_004197817 | hypothetical protein | - |
| CRN13_RS28745 (CRN13_28605) | 91240..91638 | + | 399 | WP_014343490 | hypothetical protein | - |
| CRN13_RS28750 (CRN13_28610) | 91710..94349 | + | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| CRN13_RS28755 (CRN13_28615) | 94349..94738 | + | 390 | WP_013214025 | type-F conjugative transfer system protein TrbI | - |
| CRN13_RS28760 (CRN13_28620) | 94738..95373 | + | 636 | WP_064161338 | type-F conjugative transfer system protein TraW | traW |
| CRN13_RS28765 (CRN13_28625) | 95408..95809 | + | 402 | WP_004194979 | hypothetical protein | - |
| CRN13_RS28770 (CRN13_28630) | 95806..96795 | + | 990 | WP_032441886 | conjugal transfer pilus assembly protein TraU | traU |
| CRN13_RS28775 (CRN13_28635) | 96808..97446 | + | 639 | WP_004193871 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| CRN13_RS28780 (CRN13_28640) | 97505..99460 | + | 1956 | WP_023287134 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| CRN13_RS28785 (CRN13_28645) | 99492..99746 | + | 255 | WP_023287133 | conjugal transfer protein TrbE | - |
| CRN13_RS28790 (CRN13_28650) | 99724..99972 | + | 249 | WP_013214029 | hypothetical protein | - |
| CRN13_RS28795 (CRN13_28655) | 99985..100311 | + | 327 | WP_004152676 | hypothetical protein | - |
| CRN13_RS28800 (CRN13_28660) | 100332..101084 | + | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| CRN13_RS28805 (CRN13_28665) | 101095..101334 | + | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CRN13_RS28810 (CRN13_28670) | 101306..101863 | + | 558 | WP_004152678 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| CRN13_RS28815 (CRN13_28675) | 101909..102352 | + | 444 | WP_025712708 | F-type conjugal transfer protein TrbF | - |
| CRN13_RS28820 (CRN13_28680) | 102330..103709 | + | 1380 | WP_074187349 | conjugal transfer pilus assembly protein TraH | traH |
| CRN13_RS28825 (CRN13_28685) | 103709..106552 | + | 2844 | WP_020805032 | conjugal transfer mating-pair stabilization protein TraG | traG |
| CRN13_RS28830 (CRN13_28690) | 106563..107096 | + | 534 | WP_004197891 | hypothetical protein | - |
| CRN13_RS28840 (CRN13_28700) | 107504..108233 | + | 730 | Protein_122 | conjugal transfer complement resistance protein TraT | - |
| CRN13_RS30315 | 108426..109115 | + | 690 | WP_072159541 | hypothetical protein | - |
| CRN13_RS28850 (CRN13_28710) | 109242..111524 | + | 2283 | WP_016831058 | type IV conjugative transfer system coupling protein TraD | virb4 |