T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 5194..34472
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRN13_RS27490 (CRN13_27345) | 384..1259 | + | 876 | WP_060415463 | DUF4942 domain-containing protein | - |
| CRN13_RS27505 (CRN13_27360) | 2039..2377 | + | 339 | WP_020804855 | hypothetical protein | - |
| CRN13_RS27510 (CRN13_27365) | 2434..2781 | + | 348 | WP_064182675 | hypothetical protein | - |
| CRN13_RS27515 (CRN13_27370) | 2870..3100 | + | 231 | WP_060415465 | hypothetical protein | - |
| CRN13_RS27520 (CRN13_27375) | 3147..3980 | + | 834 | WP_060415466 | N-6 DNA methylase | - |
| CRN13_RS30105 | 4266..4634 | - | 369 | WP_080848162 | hypothetical protein | - |
| CRN13_RS27525 (CRN13_27380) | 4629..5171 | + | 543 | WP_060415467 | antirestriction protein | - |
| CRN13_RS27530 (CRN13_27385) | 5194..5616 | - | 423 | WP_073972322 | transglycosylase SLT domain-containing protein | virB1 |
| CRN13_RS27535 (CRN13_27390) | 6122..6514 | + | 393 | WP_053390193 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CRN13_RS27540 (CRN13_27395) | 6752..7453 | + | 702 | WP_094898581 | hypothetical protein | - |
| CRN13_RS27545 (CRN13_27400) | 7614..7775 | + | 162 | WP_172686697 | TraY domain-containing protein | - |
| CRN13_RS27550 (CRN13_27405) | 7840..8208 | + | 369 | WP_064386081 | type IV conjugative transfer system pilin TraA | - |
| CRN13_RS27555 (CRN13_27410) | 8222..8527 | + | 306 | WP_064343526 | type IV conjugative transfer system protein TraL | traL |
| CRN13_RS27560 (CRN13_27415) | 8543..9109 | + | 567 | WP_064359954 | type IV conjugative transfer system protein TraE | traE |
| CRN13_RS27565 (CRN13_27420) | 9096..9830 | + | 735 | WP_064343528 | type-F conjugative transfer system secretin TraK | traK |
| CRN13_RS27570 (CRN13_27425) | 9830..11251 | + | 1422 | WP_053390199 | F-type conjugal transfer pilus assembly protein TraB | traB |
| CRN13_RS27575 (CRN13_27430) | 11244..11678 | + | 435 | WP_020322358 | conjugal transfer protein TraP | - |
| CRN13_RS27580 (CRN13_27435) | 11712..12296 | + | 585 | WP_064343530 | type IV conjugative transfer system lipoprotein TraV | traV |
| CRN13_RS27595 (CRN13_27450) | 12909..13097 | + | 189 | WP_053390286 | hypothetical protein | - |
| CRN13_RS30600 | 13181..13582 | + | 402 | WP_064343532 | hypothetical protein | - |
| CRN13_RS27605 (CRN13_27460) | 13579..13878 | + | 300 | WP_053390308 | hypothetical protein | - |
| CRN13_RS27610 (CRN13_27465) | 13966..14349 | + | 384 | WP_042946290 | hypothetical protein | - |
| CRN13_RS27615 (CRN13_27470) | 14442..17081 | + | 2640 | WP_064343533 | type IV secretion system protein TraC | virb4 |
| CRN13_RS27620 (CRN13_27475) | 17081..17473 | + | 393 | WP_064343534 | type-F conjugative transfer system protein TrbI | - |
| CRN13_RS27625 (CRN13_27480) | 17470..18096 | + | 627 | WP_064343535 | type-F conjugative transfer system protein TraW | traW |
| CRN13_RS27630 (CRN13_27485) | 18140..19099 | + | 960 | WP_229295972 | conjugal transfer pilus assembly protein TraU | traU |
| CRN13_RS27635 (CRN13_27490) | 19112..19759 | + | 648 | WP_064343536 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| CRN13_RS27640 (CRN13_27495) | 19756..20139 | + | 384 | WP_053390297 | hypothetical protein | - |
| CRN13_RS27645 (CRN13_27500) | 20136..22091 | + | 1956 | WP_064343537 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| CRN13_RS27650 (CRN13_27505) | 22123..22383 | + | 261 | WP_053390216 | hypothetical protein | - |
| CRN13_RS27655 (CRN13_27510) | 22376..22987 | + | 612 | WP_053390217 | hypothetical protein | - |
| CRN13_RS27660 (CRN13_27515) | 22977..23219 | + | 243 | WP_053390218 | conjugal transfer protein TrbE | - |
| CRN13_RS27665 (CRN13_27520) | 23265..23591 | + | 327 | WP_053390219 | hypothetical protein | - |
| CRN13_RS27670 (CRN13_27525) | 23612..24364 | + | 753 | WP_053390220 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| CRN13_RS27675 (CRN13_27530) | 24375..24611 | + | 237 | WP_053390221 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CRN13_RS27680 (CRN13_27535) | 24586..25146 | + | 561 | WP_039698500 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| CRN13_RS27685 (CRN13_27540) | 25133..26503 | + | 1371 | WP_075606918 | conjugal transfer pilus assembly protein TraH | traH |
| CRN13_RS27690 (CRN13_27545) | 26503..29382 | + | 2880 | WP_064386194 | conjugal transfer mating-pair stabilization protein TraG | traG |
| CRN13_RS30110 | 29399..30067 | + | 669 | WP_128317877 | hypothetical protein | - |
| CRN13_RS27700 (CRN13_27555) | 30420..31151 | + | 732 | WP_064386198 | conjugal transfer complement resistance protein TraT | - |
| CRN13_RS30605 | 31343..32035 | + | 693 | WP_202395549 | hypothetical protein | - |
| CRN13_RS27710 (CRN13_27565) | 32154..34472 | + | 2319 | WP_075606915 | type IV conjugative transfer system coupling protein TraD | virb4 |