T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 38754..77985
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJN59_RS24775 (LJN59_24780) | 36470..38761 | - | 2292 | WP_012783931 | F-type conjugative transfer protein TrbC | - |
| LJN59_RS24780 (LJN59_24785) | 38754..39824 | - | 1071 | WP_012783932 | IncI1-type conjugal transfer protein TrbB | trbB |
| LJN59_RS24785 (LJN59_24790) | 39843..41051 | - | 1209 | WP_001703845 | IncI1-type conjugal transfer protein TrbA | trbA |
| LJN59_RS24790 (LJN59_24795) | 41358..42137 | - | 780 | WP_275450201 | protein FinQ | - |
| LJN59_RS24795 (LJN59_24800) | 42764..42916 | + | 153 | WP_001387489 | Hok/Gef family protein | - |
| LJN59_RS24800 (LJN59_24805) | 42988..43239 | - | 252 | WP_001291964 | hypothetical protein | - |
| LJN59_RS25225 | 43740..43835 | + | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| LJN59_RS24810 (LJN59_24815) | 43900..44076 | - | 177 | WP_001054900 | hypothetical protein | - |
| LJN59_RS24815 (LJN59_24820) | 44468..44677 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| LJN59_RS24820 (LJN59_24825) | 44749..45411 | - | 663 | WP_012783935 | plasmid IncI1-type surface exclusion protein ExcA | - |
| LJN59_RS24825 (LJN59_24830) | 45482..47650 | - | 2169 | WP_015508354 | DotA/TraY family protein | traY |
| LJN59_RS24830 (LJN59_24835) | 47747..48331 | - | 585 | WP_012783937 | conjugal transfer protein TraX | - |
| LJN59_RS24835 (LJN59_24840) | 48360..49562 | - | 1203 | WP_012783938 | IncI1-type conjugal transfer protein TraW | traW |
| LJN59_RS24840 (LJN59_24845) | 49529..50143 | - | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
| LJN59_RS24845 (LJN59_24850) | 50143..53187 | - | 3045 | WP_012783939 | IncI1-type conjugal transfer protein TraU | traU |
| LJN59_RS24850 (LJN59_24855) | 53277..54077 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| LJN59_RS24855 (LJN59_24860) | 54061..54249 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| LJN59_RS24860 (LJN59_24865) | 54313..54717 | - | 405 | WP_000086965 | IncI1-type conjugal transfer protein TraR | traR |
| LJN59_RS24865 (LJN59_24870) | 54768..55295 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| LJN59_RS24870 (LJN59_24875) | 55295..55999 | - | 705 | WP_001493811 | IncI1-type conjugal transfer protein TraP | traP |
| LJN59_RS24875 (LJN59_24880) | 55999..57288 | - | 1290 | WP_011264042 | conjugal transfer protein TraO | traO |
| LJN59_RS24880 (LJN59_24885) | 57291..58274 | - | 984 | WP_001191880 | IncI1-type conjugal transfer protein TraN | traN |
| LJN59_RS24885 (LJN59_24890) | 58285..58977 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| LJN59_RS24890 (LJN59_24895) | 58974..59321 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| LJN59_RS24895 (LJN59_24900) | 59339..63106 | - | 3768 | WP_012783940 | LPD7 domain-containing protein | - |
| LJN59_RS24900 (LJN59_24905) | 63196..63747 | - | 552 | WP_012783942 | phospholipase D family protein | - |
| LJN59_RS24905 (LJN59_24910) | 63762..64052 | - | 291 | WP_001314267 | hypothetical protein | traK |
| LJN59_RS24910 (LJN59_24915) | 64049..65197 | - | 1149 | WP_001024971 | plasmid transfer ATPase TraJ | virB11 |
| LJN59_RS24915 (LJN59_24920) | 65194..66012 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| LJN59_RS24920 (LJN59_24925) | 66009..66467 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| LJN59_RS24925 (LJN59_24930) | 66861..67445 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| LJN59_RS24930 (LJN59_24935) | 67505..68707 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| LJN59_RS24935 (LJN59_24940) | 68793..69617 | - | 825 | WP_001238932 | conjugal transfer protein TraE | traE |
| LJN59_RS24940 (LJN59_24945) | 69768..70922 | - | 1155 | WP_001139955 | tyrosine-type recombinase/integrase | - |
| LJN59_RS24945 (LJN59_24950) | 71942..72190 | + | 249 | WP_001349157 | hypothetical protein | - |
| LJN59_RS24950 (LJN59_24955) | 72187..73479 | - | 1293 | WP_001417545 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| LJN59_RS24955 (LJN59_24960) | 73479..74135 | - | 657 | WP_001193553 | prepilin peptidase | - |
| LJN59_RS24960 (LJN59_24965) | 74120..74680 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| LJN59_RS24965 (LJN59_24970) | 74690..75304 | - | 615 | WP_001542527 | type 4 pilus major pilin | - |
| LJN59_RS24970 (LJN59_24975) | 75322..76419 | - | 1098 | WP_001492931 | type II secretion system F family protein | - |
| LJN59_RS24975 (LJN59_24980) | 76432..77985 | - | 1554 | WP_001492932 | GspE/PulE family protein | virB11 |
| LJN59_RS24980 (LJN59_24985) | 77996..78448 | - | 453 | WP_012783945 | type IV pilus biogenesis protein PilP | - |
| LJN59_RS24985 (LJN59_24990) | 78435..79730 | - | 1296 | WP_012783946 | type 4b pilus protein PilO2 | - |
| LJN59_RS24990 (LJN59_24995) | 79723..81405 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| LJN59_RS24995 (LJN59_25000) | 81419..81856 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| LJN59_RS25000 (LJN59_25005) | 81856..82923 | - | 1068 | WP_012783947 | type IV pilus biogenesis lipoprotein PilL | - |