T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 39332..76801
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HQ623_RS24930 (HQ623_24935) | 37048..39339 | - | 2292 | WP_014653261 | F-type conjugative transfer protein TrbC | - |
| HQ623_RS24935 (HQ623_24940) | 39332..40402 | - | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| HQ623_RS24940 (HQ623_24945) | 40421..41629 | - | 1209 | WP_000121274 | IncI1-type conjugal transfer protein TrbA | trbA |
| HQ623_RS24945 (HQ623_24950) | 41921..42073 | + | 153 | WP_001331364 | Hok/Gef family protein | - |
| HQ623_RS24950 (HQ623_24955) | 42145..42396 | - | 252 | WP_001291965 | hypothetical protein | - |
| HQ623_RS25645 | 42897..42992 | + | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| HQ623_RS24960 (HQ623_24965) | 43057..43233 | - | 177 | WP_001054904 | hypothetical protein | - |
| HQ623_RS24965 (HQ623_24970) | 43625..43834 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| HQ623_RS24970 (HQ623_24975) | 43906..44568 | - | 663 | WP_000653334 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HQ623_RS24975 (HQ623_24980) | 44633..46795 | - | 2163 | WP_000698351 | DotA/TraY family protein | traY |
| HQ623_RS24980 (HQ623_24985) | 46892..47476 | - | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| HQ623_RS24985 (HQ623_24990) | 47505..48707 | - | 1203 | WP_001189161 | IncI1-type conjugal transfer protein TraW | traW |
| HQ623_RS24990 (HQ623_24995) | 48674..49288 | - | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| HQ623_RS24995 (HQ623_25000) | 49288..52332 | - | 3045 | WP_001024779 | IncI1-type conjugal transfer protein TraU | traU |
| HQ623_RS25000 (HQ623_25005) | 52422..53222 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| HQ623_RS25005 (HQ623_25010) | 53206..53394 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| HQ623_RS25010 (HQ623_25015) | 53458..53862 | - | 405 | WP_000086957 | IncI1-type conjugal transfer protein TraR | traR |
| HQ623_RS25015 (HQ623_25020) | 53913..54440 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| HQ623_RS25020 (HQ623_25025) | 54440..55144 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| HQ623_RS25025 (HQ623_25030) | 55144..56433 | - | 1290 | WP_001272005 | conjugal transfer protein TraO | traO |
| HQ623_RS25030 (HQ623_25035) | 56436..57419 | - | 984 | WP_001191877 | IncI1-type conjugal transfer protein TraN | traN |
| HQ623_RS25035 (HQ623_25040) | 57430..58122 | - | 693 | WP_000138548 | DotI/IcmL family type IV secretion protein | traM |
| HQ623_RS25040 (HQ623_25045) | 58119..58466 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| HQ623_RS25045 (HQ623_25050) | 58484..62251 | - | 3768 | WP_001141529 | LPD7 domain-containing protein | - |
| HQ623_RS25050 (HQ623_25055) | 62341..62892 | - | 552 | WP_000014583 | phospholipase D family protein | - |
| HQ623_RS25055 (HQ623_25060) | 62907..63197 | - | 291 | WP_001299214 | hypothetical protein | traK |
| HQ623_RS25060 (HQ623_25065) | 63194..64342 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| HQ623_RS25065 (HQ623_25070) | 64339..65157 | - | 819 | WP_000646098 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| HQ623_RS25070 (HQ623_25075) | 65154..65612 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| HQ623_RS25075 (HQ623_25080) | 66007..66591 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| HQ623_RS25080 (HQ623_25085) | 66651..67853 | - | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| HQ623_RS25085 (HQ623_25090) | 67938..68762 | - | 825 | WP_001238939 | conjugal transfer protein TraE | traE |
| HQ623_RS25090 (HQ623_25095) | 68913..70067 | - | 1155 | WP_001139957 | tyrosine-type recombinase/integrase | - |
| HQ623_RS25650 (HQ623_25100) | 70650..70874 | + | 225 | Protein_80 | hypothetical protein | - |
| HQ623_RS25100 (HQ623_25105) | 70871..72295 | - | 1425 | WP_001389385 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HQ623_RS25105 (HQ623_25110) | 72295..72951 | - | 657 | WP_001193553 | prepilin peptidase | - |
| HQ623_RS25110 (HQ623_25115) | 72936..73496 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| HQ623_RS25115 (HQ623_25120) | 73506..74120 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| HQ623_RS25120 (HQ623_25125) | 74138..75235 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| HQ623_RS25125 (HQ623_25130) | 75248..76801 | - | 1554 | WP_000362202 | GspE/PulE family protein | virB11 |
| HQ623_RS25130 (HQ623_25135) | 76812..77264 | - | 453 | WP_001247336 | type IV pilus biogenesis protein PilP | - |
| HQ623_RS25135 (HQ623_25140) | 77251..78546 | - | 1296 | WP_000752774 | type 4b pilus protein PilO2 | - |
| HQ623_RS25140 (HQ623_25145) | 78539..80221 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| HQ623_RS25145 (HQ623_25150) | 80235..80672 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| HQ623_RS25150 (HQ623_25155) | 80672..81739 | - | 1068 | WP_000742600 | type IV pilus biogenesis lipoprotein PilL | - |