T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 7373..30845
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HQ623_RS23635 (HQ623_23640) | 6739..6966 | + | 228 | WP_000450265 | toxin-antitoxin system antitoxin VapB | - |
| HQ623_RS23640 (HQ623_23645) | 6966..7364 | + | 399 | WP_000911322 | type II toxin-antitoxin system VapC family toxin | - |
| HQ623_RS23645 (HQ623_23650) | 7373..9535 | - | 2163 | WP_000009318 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HQ623_RS23650 (HQ623_23655) | 9912..10643 | - | 732 | WP_000782438 | conjugal transfer complement resistance protein TraT | - |
| HQ623_RS23655 (HQ623_23660) | 10679..11173 | - | 495 | WP_010999946 | entry exclusion protein | - |
| HQ623_RS23660 (HQ623_23665) | 11189..14011 | - | 2823 | WP_001007087 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HQ623_RS23665 (HQ623_23670) | 14008..15390 | - | 1383 | WP_001161719 | conjugal transfer pilus assembly protein TraH | traH |
| HQ623_RS23670 (HQ623_23675) | 15380..15928 | - | 549 | WP_000055840 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HQ623_RS23675 (HQ623_23680) | 15915..16208 | - | 294 | WP_001233881 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HQ623_RS23680 (HQ623_23685) | 16422..17171 | - | 750 | WP_001226854 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HQ623_RS23685 (HQ623_23690) | 17183..17398 | - | 216 | WP_000700023 | conjugal transfer protein TrbE | - |
| HQ623_RS23690 (HQ623_23695) | 17409..19235 | - | 1827 | WP_000827529 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HQ623_RS23695 (HQ623_23700) | 19232..19651 | - | 420 | WP_001229397 | HNH endonuclease | - |
| HQ623_RS23700 (HQ623_23705) | 19688..20326 | - | 639 | WP_000554823 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HQ623_RS23705 (HQ623_23710) | 20311..20619 | - | 309 | WP_010999945 | hypothetical protein | - |
| HQ623_RS23710 (HQ623_23715) | 20638..21630 | - | 993 | WP_000833320 | conjugal transfer pilus assembly protein TraU | traU |
| HQ623_RS23715 (HQ623_23720) | 21627..22259 | - | 633 | WP_000871995 | type-F conjugative transfer system protein TraW | traW |
| HQ623_RS23720 (HQ623_23725) | 22256..22642 | - | 387 | WP_000105164 | type-F conjugative transfer system protein TrbI | - |
| HQ623_RS23725 (HQ623_23730) | 22617..25265 | - | 2649 | WP_000793310 | type IV secretion system protein TraC | virb4 |
| HQ623_RS23730 (HQ623_23735) | 25281..25544 | - | 264 | WP_001239255 | hypothetical protein | - |
| HQ623_RS23735 (HQ623_23740) | 25661..26128 | - | 468 | WP_000549562 | hypothetical protein | - |
| HQ623_RS23740 (HQ623_23745) | 26121..26342 | - | 222 | WP_001278699 | conjugal transfer protein TraR | - |
| HQ623_RS23745 (HQ623_23750) | 26477..26992 | - | 516 | WP_001079995 | type IV conjugative transfer system lipoprotein TraV | traV |
| HQ623_RS23750 (HQ623_23755) | 26989..27234 | - | 246 | WP_010999944 | DUF2689 domain-containing protein | virb4 |
| HQ623_RS23755 (HQ623_23760) | 27212..27808 | - | 597 | WP_000527897 | conjugal transfer pilus-stabilizing protein TraP | - |
| HQ623_RS23760 (HQ623_23765) | 27798..29219 | - | 1422 | WP_000146700 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HQ623_RS23765 (HQ623_23770) | 29219..29959 | - | 741 | WP_001230719 | type-F conjugative transfer system secretin TraK | traK |
| HQ623_RS23770 (HQ623_23775) | 29946..30512 | - | 567 | WP_000399768 | type IV conjugative transfer system protein TraE | traE |
| HQ623_RS23775 (HQ623_23780) | 30534..30845 | - | 312 | WP_000012129 | type IV conjugative transfer system protein TraL | traL |
| HQ623_RS23780 (HQ623_23785) | 30860..31222 | - | 363 | WP_001273051 | type IV conjugative transfer system pilin TraA | - |
| HQ623_RS23785 (HQ623_23790) | 31264..31491 | - | 228 | WP_001676655 | conjugal transfer relaxosome protein TraY | - |
| HQ623_RS23790 (HQ623_23795) | 31585..32271 | - | 687 | WP_000336297 | PAS domain-containing protein | - |
| HQ623_RS23795 (HQ623_23800) | 32464..32844 | - | 381 | WP_001151546 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HQ623_RS23800 (HQ623_23805) | 33259..33729 | + | 471 | WP_014344446 | transglycosylase SLT domain-containing protein | - |
| HQ623_RS23805 (HQ623_23810) | 34040..34858 | - | 819 | Protein_37 | DUF932 domain-containing protein | - |
| HQ623_RS23810 (HQ623_23815) | 34961..35119 | - | 159 | WP_001704449 | hypothetical protein | - |
| HQ623_RS25550 | 35205..35333 | - | 129 | WP_000372429 | hypothetical protein | - |