T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 68317..107784
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5069_RS23300 (D5069_23705) | 66033..68324 | - | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |
| D5069_RS23305 (D5069_23710) | 68317..69387 | - | 1071 | WP_000151582 | IncI1-type conjugal transfer protein TrbB | trbB |
| D5069_RS23310 (D5069_23715) | 69406..70614 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| D5069_RS23315 (D5069_23720) | 70921..71700 | - | 780 | WP_275450201 | protein FinQ | - |
| D5069_RS23320 (D5069_23725) | 72327..72479 | + | 153 | WP_001303307 | Hok/Gef family protein | - |
| D5069_RS23325 (D5069_23730) | 72551..72802 | - | 252 | WP_001291965 | hypothetical protein | - |
| D5069_RS24770 | 73726..73902 | - | 177 | WP_001054900 | hypothetical protein | - |
| D5069_RS23330 (D5069_23745) | 74111..74320 | - | 210 | Protein_79 | hemolysin expression modulator Hha | - |
| D5069_RS23335 (D5069_23750) | 74418..75032 | - | 615 | WP_000578649 | plasmid IncI1-type surface exclusion protein ExcA | - |
| D5069_RS23340 (D5069_23755) | 75108..77276 | - | 2169 | WP_000698360 | IncI1-type conjugal transfer membrane protein TraY | traY |
| D5069_RS23345 (D5069_23760) | 77373..77957 | - | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| D5069_RS23350 (D5069_23765) | 77986..79188 | - | 1203 | WP_001189159 | IncI1-type conjugal transfer protein TraW | traW |
| D5069_RS23355 (D5069_23770) | 79155..79769 | - | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
| D5069_RS23360 (D5069_23775) | 79769..82813 | - | 3045 | WP_001024752 | IncI1-type conjugal transfer protein TraU | traU |
| D5069_RS23365 (D5069_23780) | 82903..83703 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| D5069_RS23370 (D5069_23785) | 83687..83875 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| D5069_RS23375 (D5069_23790) | 83939..84343 | - | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| D5069_RS23380 (D5069_23795) | 84394..84921 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| D5069_RS23385 (D5069_23800) | 84921..85625 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| D5069_RS23390 (D5069_23805) | 85625..86914 | - | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| D5069_RS23395 (D5069_23810) | 86917..87900 | - | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| D5069_RS23400 (D5069_23815) | 87911..88603 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| D5069_RS23405 (D5069_23820) | 88600..88947 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| D5069_RS23410 (D5069_23825) | 88965..92732 | - | 3768 | WP_001141539 | LPD7 domain-containing protein | - |
| D5069_RS23415 (D5069_23830) | 92822..93373 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| D5069_RS23420 (D5069_23835) | 93388..93678 | - | 291 | WP_001299214 | hypothetical protein | traK |
| D5069_RS23425 (D5069_23840) | 93675..94823 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| D5069_RS23430 (D5069_23845) | 94820..95638 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| D5069_RS23435 (D5069_23850) | 95635..96093 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| D5069_RS23440 (D5069_23855) | 96488..97072 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| D5069_RS23445 (D5069_23860) | 97132..98334 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| D5069_RS23450 (D5069_23865) | 98420..99244 | - | 825 | WP_001238927 | conjugal transfer protein TraE | traE |
| D5069_RS23455 (D5069_23870) | 99395..100549 | - | 1155 | WP_001139958 | tyrosine-type recombinase/integrase | - |
| D5069_RS24980 (D5069_23895) | 101741..101989 | + | 249 | WP_001349157 | hypothetical protein | - |
| D5069_RS23460 (D5069_23900) | 101986..103278 | - | 1293 | WP_024198499 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| D5069_RS23465 (D5069_23905) | 103278..103934 | - | 657 | WP_001389386 | prepilin peptidase | - |
| D5069_RS23470 (D5069_23910) | 103919..104479 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| D5069_RS23475 (D5069_23915) | 104489..105103 | - | 615 | WP_000959786 | type 4 pilus major pilin | - |
| D5069_RS23480 (D5069_23920) | 105121..106218 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| D5069_RS23485 (D5069_23925) | 106231..107784 | - | 1554 | WP_000362202 | GspE/PulE family protein | virB11 |
| D5069_RS23490 (D5069_23930) | 107795..108247 | - | 453 | WP_001247334 | type IV pilus biogenesis protein PilP | - |
| D5069_RS23495 (D5069_23935) | 108234..109529 | - | 1296 | WP_000752772 | type 4b pilus protein PilO2 | - |
| D5069_RS23500 (D5069_23940) | 109522..111204 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| D5069_RS23505 (D5069_23945) | 111218..111655 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| D5069_RS23510 (D5069_23950) | 111655..112722 | - | 1068 | WP_001302629 | type IV pilus biogenesis lipoprotein PilL | - |