T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 20217..46573
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM358_RS25130 (AM358_25135) | 15373..17370 | + | 1998 | WP_000117513 | ParB/RepB/Spo0J family partition protein | - |
| AM358_RS25135 (AM358_25140) | 17410..17844 | + | 435 | WP_010999943 | conjugation system SOS inhibitor PsiB | - |
| AM358_RS25140 (AM358_25145) | 17841..18578 | + | 738 | WP_000581933 | plasmid SOS inhibition protein A | - |
| AM358_RS26035 | 18613..18741 | + | 129 | WP_000372429 | hypothetical protein | - |
| AM358_RS25775 | 18827..18985 | + | 159 | WP_001704449 | hypothetical protein | - |
| AM358_RS25780 (AM358_25150) | 19088..19906 | + | 819 | Protein_26 | DUF932 domain-containing protein | - |
| AM358_RS25150 (AM358_25155) | 20217..20687 | - | 471 | WP_001526856 | transglycosylase SLT domain-containing protein | virB1 |
| AM358_RS25160 (AM358_25165) | 21102..21482 | + | 381 | WP_001151546 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| AM358_RS25165 (AM358_25170) | 21675..22361 | + | 687 | WP_000336297 | PAS domain-containing protein | - |
| AM358_RS25170 (AM358_25175) | 22455..22682 | + | 228 | WP_001676655 | conjugal transfer relaxosome protein TraY | - |
| AM358_RS25175 (AM358_25180) | 22724..23086 | + | 363 | WP_001274201 | type IV conjugative transfer system pilin TraA | - |
| AM358_RS25180 (AM358_25185) | 23101..23412 | + | 312 | WP_000012129 | type IV conjugative transfer system protein TraL | traL |
| AM358_RS25185 (AM358_25190) | 23434..24000 | + | 567 | WP_000399768 | type IV conjugative transfer system protein TraE | traE |
| AM358_RS25190 (AM358_25195) | 23987..24727 | + | 741 | WP_001230719 | type-F conjugative transfer system secretin TraK | traK |
| AM358_RS25195 (AM358_25200) | 24727..26148 | + | 1422 | WP_000146700 | F-type conjugal transfer pilus assembly protein TraB | traB |
| AM358_RS25200 (AM358_25205) | 26138..26734 | + | 597 | WP_000527896 | conjugal transfer pilus-stabilizing protein TraP | - |
| AM358_RS25205 (AM358_25210) | 26712..26957 | + | 246 | WP_010999944 | DUF2689 domain-containing protein | virb4 |
| AM358_RS25210 (AM358_25215) | 26954..27469 | + | 516 | WP_001079995 | type IV conjugative transfer system lipoprotein TraV | traV |
| AM358_RS25215 (AM358_25220) | 27604..27825 | + | 222 | WP_001278699 | conjugal transfer protein TraR | - |
| AM358_RS25220 (AM358_25225) | 27818..28285 | + | 468 | WP_000549562 | hypothetical protein | - |
| AM358_RS25225 (AM358_25230) | 28402..28665 | + | 264 | WP_001239255 | hypothetical protein | - |
| AM358_RS25230 (AM358_25235) | 28681..31329 | + | 2649 | WP_000793310 | type IV secretion system protein TraC | virb4 |
| AM358_RS25235 (AM358_25240) | 31304..31690 | + | 387 | WP_000105164 | type-F conjugative transfer system protein TrbI | - |
| AM358_RS25240 (AM358_25245) | 31687..32319 | + | 633 | WP_000871995 | type-F conjugative transfer system protein TraW | traW |
| AM358_RS25245 (AM358_25250) | 32316..33308 | + | 993 | WP_000833320 | conjugal transfer pilus assembly protein TraU | traU |
| AM358_RS25250 (AM358_25255) | 33327..33635 | + | 309 | WP_010999945 | hypothetical protein | - |
| AM358_RS25255 (AM358_25260) | 33620..34258 | + | 639 | WP_000554823 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| AM358_RS25260 (AM358_25265) | 34295..34714 | + | 420 | WP_001229397 | HNH endonuclease | - |
| AM358_RS25265 (AM358_25270) | 34711..36537 | + | 1827 | WP_000827528 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| AM358_RS25270 (AM358_25275) | 36548..36763 | + | 216 | WP_000700023 | conjugal transfer protein TrbE | - |
| AM358_RS25275 (AM358_25280) | 36775..37524 | + | 750 | WP_001226854 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| AM358_RS25280 (AM358_25285) | 37738..38031 | + | 294 | WP_001233881 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AM358_RS25285 (AM358_25290) | 38018..38566 | + | 549 | WP_000055840 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| AM358_RS25290 (AM358_25295) | 38556..39938 | + | 1383 | WP_001161719 | conjugal transfer pilus assembly protein TraH | traH |
| AM358_RS25295 (AM358_25300) | 39935..42757 | + | 2823 | WP_001007086 | conjugal transfer mating-pair stabilization protein TraG | traG |
| AM358_RS25300 (AM358_25305) | 42773..43267 | + | 495 | WP_010999946 | entry exclusion protein | - |
| AM358_RS25305 (AM358_25310) | 43303..44034 | + | 732 | WP_000782438 | conjugal transfer complement resistance protein TraT | - |
| AM358_RS25310 (AM358_25315) | 44411..46573 | + | 2163 | WP_000009318 | type IV conjugative transfer system coupling protein TraD | virb4 |
| AM358_RS25315 (AM358_25320) | 46582..46980 | - | 399 | WP_000911322 | type II toxin-antitoxin system VapC family toxin | - |
| AM358_RS25320 (AM358_25325) | 46980..47207 | - | 228 | WP_000450265 | toxin-antitoxin system antitoxin VapB | - |