T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 8637..18962
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U1497_RS00020 (pPan376-incN__00005) | 4488..5921 | - | 1434 | WP_001288435 | DNA cytosine methyltransferase | - |
| U1497_RS00025 (pPan376-incN__00006) | 6015..6287 | + | 273 | Protein_4 | IS1 family transposase | - |
| U1497_RS00030 (pPan376-incN__00007) | 6307..6504 | - | 198 | WP_000844102 | hypothetical protein | - |
| U1497_RS00035 (pPan376-incN__00008) | 6509..7150 | - | 642 | WP_001694850 | restriction endonuclease | - |
| U1497_RS00040 (pPan376-incN__00009) | 7206..7439 | - | 234 | WP_001191790 | hypothetical protein | - |
| U1497_RS00045 (pPan376-incN__00010) | 7553..7867 | - | 315 | WP_000734776 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| U1497_RS00050 (pPan376-incN__00011) | 7830..8207 | - | 378 | WP_000504251 | hypothetical protein | - |
| U1497_RS00055 (pPan376-incN__00012) | 8223..8594 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| U1497_RS00060 (pPan376-incN__00013) | 8637..9371 | + | 735 | WP_000033783 | lytic transglycosylase domain-containing protein | virB1 |
| U1497_RS00065 (pPan376-incN__00014) | 9380..9661 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| U1497_RS00070 (pPan376-incN__00015) | 9671..9964 | + | 294 | WP_000209137 | TrbC/VirB2 family protein | virB2 |
| U1497_RS00075 (pPan376-incN__00016) | 10014..10331 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| U1497_RS00080 (pPan376-incN__00017) | 10331..12931 | + | 2601 | WP_001200711 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| U1497_RS00085 (pPan376-incN__00018) | 12949..13662 | + | 714 | WP_000749362 | type IV secretion system protein | virB5 |
| U1497_RS00090 (pPan376-incN__00019) | 13670..13897 | + | 228 | WP_000734973 | IncN-type entry exclusion lipoprotein EexN | - |
| U1497_RS00095 (pPan376-incN__00020) | 13913..14953 | + | 1041 | WP_000886022 | type IV secretion system protein | virB6 |
| U1497_RS00100 | 15024..15182 | + | 159 | WP_012561180 | hypothetical protein | - |
| U1497_RS00105 (pPan376-incN__00021) | 15172..15870 | + | 699 | WP_000646594 | virB8 family protein | virB8 |
| U1497_RS00110 (pPan376-incN__00022) | 15881..16765 | + | 885 | WP_000735067 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| U1497_RS00115 (pPan376-incN__00023) | 16765..17925 | + | 1161 | WP_000101711 | type IV secretion system protein VirB10 | virB10 |
| U1497_RS00120 (pPan376-incN__00024) | 17967..18962 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| U1497_RS00125 (pPan376-incN__00025) | 18962..19207 | + | 246 | Protein_24 | phospholipase D-like domain-containing protein | - |
| U1497_RS00130 | 19213..19431 | + | 219 | Protein_25 | relaxase | - |
| U1497_RS00135 (pPan376-incN__00026) | 19463..20113 | - | 651 | WP_000164043 | tetracycline resistance transcriptional repressor TetR(A) | - |
| U1497_RS00140 (pPan376-incN__00027) | 20219..21418 | + | 1200 | WP_000804064 | tetracycline efflux MFS transporter Tet(A) | - |
| U1497_RS00145 (pPan376-incN__00028) | 21450..22334 | - | 885 | WP_000058717 | DMT family transporter | - |
| U1497_RS00150 | 22472..22864 | - | 393 | WP_001351729 | cysteine hydrolase family protein | - |