T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 8696..23976
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U1468_RS00020 (pPan61-incN__00005) | 4547..5980 | - | 1434 | WP_001288435 | DNA cytosine methyltransferase | - |
| U1468_RS00025 (pPan61-incN__00006) | 6074..6346 | + | 273 | Protein_4 | IS1 family transposase | - |
| U1468_RS00030 (pPan61-incN__00007) | 6366..6563 | - | 198 | WP_000844102 | hypothetical protein | - |
| U1468_RS00035 (pPan61-incN__00008) | 6568..7209 | - | 642 | WP_001694850 | restriction endonuclease | - |
| U1468_RS00040 (pPan61-incN__00009) | 7265..7498 | - | 234 | WP_001191790 | hypothetical protein | - |
| U1468_RS00045 (pPan61-incN__00010) | 7612..7926 | - | 315 | WP_000734776 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| U1468_RS00050 (pPan61-incN__00011) | 7889..8266 | - | 378 | WP_000504251 | hypothetical protein | - |
| U1468_RS00055 (pPan61-incN__00012) | 8282..8653 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| U1468_RS00060 (pPan61-incN__00013) | 8696..9430 | + | 735 | WP_000033783 | lytic transglycosylase domain-containing protein | virB1 |
| U1468_RS00065 (pPan61-incN__00014) | 9439..9720 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| U1468_RS00070 (pPan61-incN__00015) | 9730..10023 | + | 294 | WP_000209137 | TrbC/VirB2 family protein | virB2 |
| U1468_RS00075 (pPan61-incN__00016) | 10073..10390 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| U1468_RS00080 (pPan61-incN__00017) | 10390..12990 | + | 2601 | WP_001200711 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| U1468_RS00085 (pPan61-incN__00018) | 13008..13721 | + | 714 | WP_000749362 | type IV secretion system protein | virB5 |
| U1468_RS00090 (pPan61-incN__00019) | 13729..13956 | + | 228 | WP_000734973 | IncN-type entry exclusion lipoprotein EexN | - |
| U1468_RS00095 (pPan61-incN__00020) | 13972..15012 | + | 1041 | WP_000886022 | type IV secretion system protein | virB6 |
| U1468_RS00100 (pPan61-incN__00021) | 15158..18163 | - | 3006 | WP_001143760 | Tn3-like element Tn3 family transposase | - |
| U1468_RS00105 (pPan61-incN__00022) | 18327..18884 | + | 558 | WP_001235713 | recombinase family protein | - |
| U1468_RS00110 (pPan61-incN__00023) | 19067..19927 | + | 861 | WP_000027057 | broad-spectrum class A beta-lactamase TEM-1 | - |
| U1468_RS00115 (pPan61-incN__00024) | 20186..20884 | + | 699 | WP_000646594 | virB8 family protein | virB8 |
| U1468_RS00120 (pPan61-incN__00025) | 20895..21779 | + | 885 | WP_000735067 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| U1468_RS00125 (pPan61-incN__00026) | 21779..22939 | + | 1161 | WP_000101711 | type IV secretion system protein VirB10 | virB10 |
| U1468_RS00130 (pPan61-incN__00027) | 22981..23976 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| U1468_RS00135 (pPan61-incN__00028) | 23976..24221 | + | 246 | Protein_26 | phospholipase D-like domain-containing protein | - |
| U1468_RS00140 | 24227..24445 | + | 219 | Protein_27 | relaxase | - |
| U1468_RS00145 (pPan61-incN__00029) | 24477..25127 | - | 651 | WP_000164043 | tetracycline resistance transcriptional repressor TetR(A) | - |
| U1468_RS00150 (pPan61-incN__00030) | 25233..26432 | + | 1200 | WP_000804064 | tetracycline efflux MFS transporter Tet(A) | - |
| U1468_RS00155 (pPan61-incN__00031) | 26464..27348 | - | 885 | WP_000058717 | DMT family transporter | - |
| U1468_RS00160 | 27486..27878 | - | 393 | WP_001351729 | cysteine hydrolase family protein | - |