T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 59480..103305
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IN817_RS23225 (IN817_23225) | 57196..59487 | - | 2292 | WP_011264051 | F-type conjugative transfer protein TrbC | - |
| IN817_RS23230 (IN817_23230) | 59480..60550 | - | 1071 | WP_011264050 | IncI1-type conjugal transfer protein TrbB | trbB |
| IN817_RS23235 (IN817_23235) | 60569..61777 | - | 1209 | WP_011264049 | IncI1-type conjugal transfer protein TrbA | trbA |
| IN817_RS23240 (IN817_23240) | 62084..62866 | - | 783 | WP_023063753 | protein FinQ | - |
| IN817_RS23245 (IN817_23245) | 63062..63379 | + | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| IN817_RS23250 (IN817_23250) | 63376..63909 | - | 534 | WP_001221666 | lipocalin family protein | - |
| IN817_RS23255 (IN817_23255) | 64003..65148 | - | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| IN817_RS23260 (IN817_23260) | 65472..66734 | - | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| IN817_RS23265 (IN817_23265) | 66887..67261 | - | 375 | WP_223349261 | hypothetical protein | - |
| IN817_RS23270 (IN817_23270) | 67582..67734 | + | 153 | WP_001387489 | Hok/Gef family protein | - |
| IN817_RS23275 (IN817_23275) | 67806..68057 | - | 252 | WP_001291964 | hypothetical protein | - |
| IN817_RS24435 | 68558..68653 | + | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| IN817_RS23285 (IN817_23285) | 68718..68894 | - | 177 | WP_001054897 | hypothetical protein | - |
| IN817_RS23290 (IN817_23290) | 69286..69495 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| IN817_RS23295 (IN817_23295) | 69567..70229 | - | 663 | WP_000644796 | plasmid IncI1-type surface exclusion protein ExcA | - |
| IN817_RS23300 (IN817_23300) | 70300..72468 | - | 2169 | WP_023518847 | DotA/TraY family protein | traY |
| IN817_RS23305 (IN817_23305) | 72565..73149 | - | 585 | WP_001746157 | IncI1-type conjugal transfer protein TraX | - |
| IN817_RS23310 (IN817_23310) | 73178..74380 | - | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| IN817_RS23315 (IN817_23315) | 74347..74961 | - | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| IN817_RS23320 (IN817_23320) | 74961..78005 | - | 3045 | WP_023518848 | IncI1-type conjugal transfer protein TraU | traU |
| IN817_RS23325 (IN817_23325) | 78095..78895 | - | 801 | WP_193627104 | IncI1-type conjugal transfer protein TraT | traT |
| IN817_RS23330 (IN817_23330) | 78879..79067 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| IN817_RS23335 (IN817_23335) | 79131..79535 | - | 405 | WP_000086965 | IncI1-type conjugal transfer protein TraR | traR |
| IN817_RS23340 (IN817_23340) | 79586..80113 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| IN817_RS23345 (IN817_23345) | 80113..80817 | - | 705 | WP_001493811 | IncI1-type conjugal transfer protein TraP | traP |
| IN817_RS23350 (IN817_23350) | 80817..82106 | - | 1290 | WP_011264042 | conjugal transfer protein TraO | traO |
| IN817_RS23355 (IN817_23355) | 82109..83092 | - | 984 | WP_001191880 | IncI1-type conjugal transfer protein TraN | traN |
| IN817_RS23360 (IN817_23360) | 83103..83795 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| IN817_RS23365 (IN817_23365) | 83792..84139 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| IN817_RS23370 (IN817_23370) | 84157..87924 | - | 3768 | WP_193627105 | LPD7 domain-containing protein | - |
| IN817_RS23375 (IN817_23375) | 88014..88565 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| IN817_RS23380 (IN817_23380) | 88580..88870 | - | 291 | WP_001372180 | hypothetical protein | traK |
| IN817_RS23385 (IN817_23385) | 88867..90015 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| IN817_RS23390 (IN817_23390) | 90012..90830 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| IN817_RS23395 (IN817_23395) | 90827..91285 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| IN817_RS23400 (IN817_23400) | 91680..92264 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| IN817_RS23405 (IN817_23405) | 92324..93526 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| IN817_RS23410 (IN817_23410) | 93612..94436 | - | 825 | WP_001238929 | conjugal transfer protein TraE | traE |
| IN817_RS23415 (IN817_23415) | 94587..95741 | - | 1155 | WP_001139958 | tyrosine-type recombinase/integrase | - |
| IN817_RS24440 (IN817_23420) | 96645..96869 | - | 225 | Protein_113 | hypothetical protein | - |
| IN817_RS23425 (IN817_23425) | 97471..98799 | - | 1329 | WP_001496394 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| IN817_RS23430 (IN817_23430) | 98799..99455 | - | 657 | WP_001193553 | prepilin peptidase | - |
| IN817_RS23435 (IN817_23435) | 99440..100000 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| IN817_RS23440 (IN817_23440) | 100010..100624 | - | 615 | WP_000959786 | type 4 pilus major pilin | - |
| IN817_RS23445 (IN817_23445) | 100642..101739 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| IN817_RS23450 (IN817_23450) | 101752..103305 | - | 1554 | WP_000362202 | GspE/PulE family protein | virB11 |
| IN817_RS23455 (IN817_23455) | 103316..103768 | - | 453 | WP_001247334 | type IV pilus biogenesis protein PilP | - |
| IN817_RS23460 (IN817_23460) | 103755..105050 | - | 1296 | WP_000752772 | type 4b pilus protein PilO2 | - |
| IN817_RS23465 (IN817_23465) | 105043..106725 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| IN817_RS23470 (IN817_23470) | 106739..107176 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| IN817_RS23475 (IN817_23475) | 107176..108243 | - | 1068 | WP_001302629 | type IV pilus biogenesis lipoprotein PilL | - |