T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 40464..78816
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ITP16_RS23990 (ITP16_23990) | 38180..40471 | - | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |
| ITP16_RS23995 (ITP16_23995) | 40464..41534 | - | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| ITP16_RS24000 (ITP16_24000) | 41553..42761 | - | 1209 | WP_194946672 | IncI1-type conjugal transfer protein TrbA | trbA |
| ITP16_RS24005 (ITP16_24005) | 43053..43205 | + | 153 | WP_001303307 | Hok/Gef family protein | - |
| ITP16_RS24010 (ITP16_24010) | 43277..43528 | - | 252 | WP_001291965 | hypothetical protein | - |
| ITP16_RS24015 (ITP16_24015) | 44452..44628 | - | 177 | WP_001054900 | hypothetical protein | - |
| ITP16_RS24020 (ITP16_24020) | 45020..45229 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| ITP16_RS24025 (ITP16_24025) | 45301..45963 | - | 663 | WP_000644794 | plasmid IncI1-type surface exclusion protein ExcA | - |
| ITP16_RS24030 (ITP16_24030) | 46034..48202 | - | 2169 | WP_000698368 | DotA/TraY family protein | traY |
| ITP16_RS24035 (ITP16_24035) | 48299..48883 | - | 585 | WP_001037998 | conjugal transfer protein TraX | - |
| ITP16_RS24040 (ITP16_24040) | 48912..50114 | - | 1203 | WP_001697941 | IncI1-type conjugal transfer protein TraW | traW |
| ITP16_RS24045 (ITP16_24045) | 50081..50695 | - | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| ITP16_RS24050 (ITP16_24050) | 50695..53739 | - | 3045 | WP_097735579 | IncI1-type conjugal transfer protein TraU | traU |
| ITP16_RS24055 (ITP16_24055) | 53829..54629 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| ITP16_RS24060 (ITP16_24060) | 54613..54801 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| ITP16_RS24065 (ITP16_24065) | 54865..55269 | - | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| ITP16_RS24070 (ITP16_24070) | 55320..55847 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| ITP16_RS24075 (ITP16_24075) | 55847..56551 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| ITP16_RS24080 (ITP16_24080) | 56551..57840 | - | 1290 | WP_001271994 | conjugal transfer protein TraO | traO |
| ITP16_RS24085 (ITP16_24085) | 57843..58826 | - | 984 | WP_001191879 | IncI1-type conjugal transfer protein TraN | traN |
| ITP16_RS24090 (ITP16_24090) | 58837..59529 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| ITP16_RS24095 (ITP16_24095) | 59526..59873 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| ITP16_RS24100 (ITP16_24100) | 59891..63657 | - | 3767 | Protein_70 | LPD7 domain-containing protein | - |
| ITP16_RS24105 (ITP16_24105) | 63747..64298 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| ITP16_RS24110 (ITP16_24110) | 64313..64603 | - | 291 | WP_001299214 | hypothetical protein | traK |
| ITP16_RS24115 (ITP16_24115) | 64600..65748 | - | 1149 | WP_052979471 | plasmid transfer ATPase TraJ | virB11 |
| ITP16_RS24120 (ITP16_24120) | 65745..66563 | - | 819 | WP_000646095 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| ITP16_RS24125 (ITP16_24125) | 66560..67018 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| ITP16_RS24130 (ITP16_24130) | 67413..67997 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| ITP16_RS24135 (ITP16_24135) | 68057..69259 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| ITP16_RS24140 (ITP16_24140) | 69345..70169 | - | 825 | WP_001545755 | conjugal transfer protein TraE | traE |
| ITP16_RS24145 (ITP16_24145) | 70320..71474 | - | 1155 | WP_001139958 | tyrosine-type recombinase/integrase | - |
| ITP16_RS24445 | 71979..72222 | + | 244 | Protein_80 | hypothetical protein | - |
| ITP16_RS24155 (ITP16_24155) | 73079..74323 | - | 1245 | WP_228772073 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| ITP16_RS24160 (ITP16_24160) | 74323..74979 | - | 657 | WP_001193549 | A24 family peptidase | - |
| ITP16_RS24165 (ITP16_24165) | 74964..75524 | - | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| ITP16_RS24170 (ITP16_24170) | 75534..76148 | - | 615 | WP_000908226 | type 4 pilus major pilin | - |
| ITP16_RS24175 (ITP16_24175) | 76165..77250 | - | 1086 | WP_001208802 | type II secretion system F family protein | - |
| ITP16_RS24180 (ITP16_24180) | 77263..78816 | - | 1554 | WP_000362206 | GspE/PulE family protein | virB11 |
| ITP16_RS24185 (ITP16_24185) | 78827..79279 | - | 453 | WP_001247337 | type IV pilus biogenesis protein PilP | - |
| ITP16_RS24190 (ITP16_24190) | 79266..80561 | - | 1296 | WP_000752780 | type 4b pilus protein PilO2 | - |
| ITP16_RS24195 (ITP16_24195) | 80554..82236 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| ITP16_RS24200 (ITP16_24200) | 82250..82687 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| ITP16_RS24205 (ITP16_24205) | 82687..83754 | - | 1068 | WP_001360287 | type IV pilus biogenesis lipoprotein PilL | - |