T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 48200..92025
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IN819_RS24365 (IN819_24400) | 45916..48207 | - | 2292 | WP_011264051 | F-type conjugative transfer protein TrbC | - |
| IN819_RS24370 (IN819_24405) | 48200..49270 | - | 1071 | WP_011264050 | IncI1-type conjugal transfer protein TrbB | trbB |
| IN819_RS24375 (IN819_24410) | 49289..50497 | - | 1209 | WP_011264049 | IncI1-type conjugal transfer protein TrbA | trbA |
| IN819_RS24380 (IN819_24415) | 50804..51586 | - | 783 | WP_227496365 | protein FinQ | - |
| IN819_RS24385 (IN819_24420) | 51782..52099 | + | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| IN819_RS24390 (IN819_24425) | 52096..52629 | - | 534 | WP_001221666 | lipocalin family protein | - |
| IN819_RS24395 (IN819_24430) | 52723..53868 | - | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| IN819_RS24400 (IN819_24435) | 54192..55454 | - | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| IN819_RS24405 (IN819_24440) | 55607..55981 | - | 375 | WP_223349261 | hypothetical protein | - |
| IN819_RS24410 (IN819_24445) | 56302..56454 | + | 153 | WP_001387489 | Hok/Gef family protein | - |
| IN819_RS24415 (IN819_24450) | 56526..56777 | - | 252 | WP_001291964 | hypothetical protein | - |
| IN819_RS25310 | 57278..57373 | + | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| IN819_RS24425 (IN819_24460) | 57438..57614 | - | 177 | WP_001054897 | hypothetical protein | - |
| IN819_RS24430 (IN819_24465) | 58006..58215 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| IN819_RS24435 (IN819_24470) | 58287..58949 | - | 663 | WP_000644796 | plasmid IncI1-type surface exclusion protein ExcA | - |
| IN819_RS24440 (IN819_24475) | 59020..61188 | - | 2169 | WP_023518847 | DotA/TraY family protein | traY |
| IN819_RS24445 (IN819_24480) | 61285..61869 | - | 585 | WP_001746157 | IncI1-type conjugal transfer protein TraX | - |
| IN819_RS24450 (IN819_24485) | 61898..63100 | - | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| IN819_RS24455 (IN819_24490) | 63067..63681 | - | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| IN819_RS24460 (IN819_24495) | 63681..66725 | - | 3045 | WP_023518848 | IncI1-type conjugal transfer protein TraU | traU |
| IN819_RS24465 (IN819_24500) | 66815..67615 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| IN819_RS24470 (IN819_24505) | 67599..67787 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| IN819_RS24475 (IN819_24510) | 67851..68255 | - | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| IN819_RS24480 (IN819_24515) | 68306..68833 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| IN819_RS24485 (IN819_24520) | 68833..69537 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| IN819_RS24490 (IN819_24525) | 69537..70826 | - | 1290 | WP_167651943 | conjugal transfer protein TraO | traO |
| IN819_RS24495 (IN819_24530) | 70829..71812 | - | 984 | WP_001191880 | IncI1-type conjugal transfer protein TraN | traN |
| IN819_RS24500 (IN819_24535) | 71823..72515 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| IN819_RS24505 (IN819_24540) | 72512..72859 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| IN819_RS24510 (IN819_24545) | 72877..76644 | - | 3768 | WP_193628225 | LPD7 domain-containing protein | - |
| IN819_RS24515 (IN819_24550) | 76734..77285 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| IN819_RS24520 (IN819_24555) | 77300..77590 | - | 291 | WP_001299214 | hypothetical protein | traK |
| IN819_RS24525 (IN819_24560) | 77587..78735 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| IN819_RS24530 (IN819_24565) | 78732..79550 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| IN819_RS24535 (IN819_24570) | 79547..80005 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| IN819_RS24540 (IN819_24575) | 80400..80984 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| IN819_RS24545 (IN819_24580) | 81044..82246 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| IN819_RS24550 (IN819_24585) | 82332..83156 | - | 825 | WP_001238929 | conjugal transfer protein TraE | traE |
| IN819_RS24555 (IN819_24590) | 83307..84461 | - | 1155 | WP_001139958 | tyrosine-type recombinase/integrase | - |
| IN819_RS25315 (IN819_24595) | 85877..86098 | + | 222 | Protein_102 | prepilin | - |
| IN819_RS24565 (IN819_24600) | 86095..87519 | - | 1425 | WP_001389385 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| IN819_RS24570 (IN819_24605) | 87519..88175 | - | 657 | WP_001193553 | prepilin peptidase | - |
| IN819_RS24575 (IN819_24610) | 88160..88720 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| IN819_RS24580 (IN819_24615) | 88730..89344 | - | 615 | WP_000959786 | type 4 pilus major pilin | - |
| IN819_RS24585 (IN819_24620) | 89362..90459 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| IN819_RS24590 (IN819_24625) | 90472..92025 | - | 1554 | WP_167651944 | GspE/PulE family protein | virB11 |
| IN819_RS24595 (IN819_24630) | 92036..92488 | - | 453 | WP_001247334 | type IV pilus biogenesis protein PilP | - |
| IN819_RS24600 (IN819_24635) | 92475..93770 | - | 1296 | WP_000752772 | type 4b pilus protein PilO2 | - |
| IN819_RS24605 (IN819_24640) | 93763..95445 | - | 1683 | WP_155952833 | PilN family type IVB pilus formation outer membrane protein | - |
| IN819_RS24610 (IN819_24645) | 95459..95896 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| IN819_RS24615 (IN819_24650) | 95896..96963 | - | 1068 | WP_001302629 | type IV pilus biogenesis lipoprotein PilL | - |