T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 32718..41808
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5068_RS23695 (D5068_24045) | 28749..28982 | - | 234 | WP_001191890 | hypothetical protein | - |
| D5068_RS23700 (D5068_24050) | 28964..29581 | - | 618 | WP_001249395 | hypothetical protein | - |
| D5068_RS23705 (D5068_24055) | 29749..32721 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| D5068_RS23710 (D5068_24060) | 32718..34583 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| D5068_RS23715 (D5068_24065) | 34633..35178 | + | 546 | WP_000228720 | hypothetical protein | - |
| D5068_RS23720 (D5068_24070) | 35135..35764 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| D5068_RS23725 (D5068_24075) | 35774..36220 | + | 447 | WP_000122507 | hypothetical protein | - |
| D5068_RS23730 (D5068_24080) | 36230..36607 | + | 378 | WP_000869297 | hypothetical protein | - |
| D5068_RS23735 (D5068_24085) | 36607..37269 | + | 663 | WP_001231464 | hypothetical protein | - |
| D5068_RS23740 (D5068_24090) | 37605..37970 | + | 366 | WP_001052530 | hypothetical protein | - |
| D5068_RS23745 (D5068_24095) | 38115..38396 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| D5068_RS23750 (D5068_24100) | 38393..39019 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| D5068_RS23755 (D5068_24105) | 39003..39920 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| D5068_RS23760 (D5068_24110) | 39920..41233 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| D5068_RS23765 (D5068_24115) | 41230..41808 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| D5068_RS23770 (D5068_24120) | 41812..42204 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| D5068_RS23775 (D5068_24125) | 42489..43751 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| D5068_RS23780 (D5068_24130) | 44075..45220 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| D5068_RS23785 (D5068_24135) | 45314..45847 | + | 534 | WP_001221666 | lipocalin family protein | - |
| D5068_RS23790 (D5068_24140) | 45844..46161 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| D5068_RS25490 (D5068_24145) | 46418..46783 | + | 366 | Protein_61 | LuxR family transcriptional regulator | - |