T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 39332..76801
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPY00_RS24970 (HPY00_24975) | 37048..39339 | - | 2292 | WP_014653261 | F-type conjugative transfer protein TrbC | - |
| HPY00_RS24975 (HPY00_24980) | 39332..40402 | - | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| HPY00_RS24980 (HPY00_24985) | 40421..41629 | - | 1209 | WP_000121274 | IncI1-type conjugal transfer protein TrbA | trbA |
| HPY00_RS24985 (HPY00_24990) | 41921..42073 | + | 153 | WP_001331364 | Hok/Gef family protein | - |
| HPY00_RS24990 (HPY00_24995) | 42145..42396 | - | 252 | WP_001291965 | hypothetical protein | - |
| HPY00_RS25685 | 42897..42992 | + | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| HPY00_RS25000 (HPY00_25005) | 43057..43233 | - | 177 | WP_001054904 | hypothetical protein | - |
| HPY00_RS25005 (HPY00_25010) | 43625..43834 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| HPY00_RS25010 (HPY00_25015) | 43906..44568 | - | 663 | WP_000653334 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HPY00_RS25015 (HPY00_25020) | 44633..46795 | - | 2163 | WP_000698351 | DotA/TraY family protein | traY |
| HPY00_RS25020 (HPY00_25025) | 46892..47476 | - | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| HPY00_RS25025 (HPY00_25030) | 47505..48707 | - | 1203 | WP_001189161 | IncI1-type conjugal transfer protein TraW | traW |
| HPY00_RS25030 (HPY00_25035) | 48674..49288 | - | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| HPY00_RS25035 (HPY00_25040) | 49288..52332 | - | 3045 | WP_001024779 | IncI1-type conjugal transfer protein TraU | traU |
| HPY00_RS25040 (HPY00_25045) | 52422..53222 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| HPY00_RS25045 (HPY00_25050) | 53206..53394 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| HPY00_RS25050 (HPY00_25055) | 53458..53862 | - | 405 | WP_000086957 | IncI1-type conjugal transfer protein TraR | traR |
| HPY00_RS25055 (HPY00_25060) | 53913..54440 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| HPY00_RS25060 (HPY00_25065) | 54440..55144 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| HPY00_RS25065 (HPY00_25070) | 55144..56433 | - | 1290 | WP_001272005 | conjugal transfer protein TraO | traO |
| HPY00_RS25070 (HPY00_25075) | 56436..57419 | - | 984 | WP_001191877 | IncI1-type conjugal transfer protein TraN | traN |
| HPY00_RS25075 (HPY00_25080) | 57430..58122 | - | 693 | WP_000138548 | DotI/IcmL family type IV secretion protein | traM |
| HPY00_RS25080 (HPY00_25085) | 58119..58466 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| HPY00_RS25085 (HPY00_25090) | 58484..62251 | - | 3768 | WP_001141529 | LPD7 domain-containing protein | - |
| HPY00_RS25090 (HPY00_25095) | 62341..62892 | - | 552 | WP_000014583 | phospholipase D family protein | - |
| HPY00_RS25095 (HPY00_25100) | 62907..63197 | - | 291 | WP_001299214 | hypothetical protein | traK |
| HPY00_RS25100 (HPY00_25105) | 63194..64342 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| HPY00_RS25105 (HPY00_25110) | 64339..65157 | - | 819 | WP_000646098 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| HPY00_RS25110 (HPY00_25115) | 65154..65612 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| HPY00_RS25115 (HPY00_25120) | 66007..66591 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| HPY00_RS25120 (HPY00_25125) | 66651..67853 | - | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| HPY00_RS25125 (HPY00_25130) | 67938..68762 | - | 825 | WP_001238939 | conjugal transfer protein TraE | traE |
| HPY00_RS25130 (HPY00_25135) | 68913..70067 | - | 1155 | WP_001139957 | tyrosine-type recombinase/integrase | - |
| HPY00_RS25690 (HPY00_25140) | 70650..70874 | + | 225 | Protein_80 | hypothetical protein | - |
| HPY00_RS25140 (HPY00_25145) | 70871..72295 | - | 1425 | WP_001389385 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HPY00_RS25145 (HPY00_25150) | 72295..72951 | - | 657 | WP_001193553 | prepilin peptidase | - |
| HPY00_RS25150 (HPY00_25155) | 72936..73496 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| HPY00_RS25155 (HPY00_25160) | 73506..74120 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| HPY00_RS25160 (HPY00_25165) | 74138..75235 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| HPY00_RS25165 (HPY00_25170) | 75248..76801 | - | 1554 | WP_000362202 | GspE/PulE family protein | virB11 |
| HPY00_RS25170 (HPY00_25175) | 76812..77264 | - | 453 | WP_001247336 | type IV pilus biogenesis protein PilP | - |
| HPY00_RS25175 (HPY00_25180) | 77251..78546 | - | 1296 | WP_000752774 | type 4b pilus protein PilO2 | - |
| HPY00_RS25180 (HPY00_25185) | 78539..80221 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| HPY00_RS25185 (HPY00_25190) | 80235..80672 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| HPY00_RS25190 (HPY00_25195) | 80672..81739 | - | 1068 | WP_000742600 | type IV pilus biogenesis lipoprotein PilL | - |