T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 7373..32183
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPY00_RS23670 (HPY00_23675) | 6739..6966 | + | 228 | WP_000450265 | toxin-antitoxin system antitoxin VapB | - |
| HPY00_RS23675 (HPY00_23680) | 6966..7364 | + | 399 | WP_000911322 | type II toxin-antitoxin system VapC family toxin | - |
| HPY00_RS23680 (HPY00_23685) | 7373..9535 | - | 2163 | WP_000009318 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HPY00_RS23685 (HPY00_23690) | 9912..10643 | - | 732 | WP_000782438 | conjugal transfer complement resistance protein TraT | - |
| HPY00_RS23690 (HPY00_23695) | 10679..11173 | - | 495 | WP_010999946 | entry exclusion protein | - |
| HPY00_RS23695 (HPY00_23700) | 11189..14011 | - | 2823 | WP_001007087 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HPY00_RS23700 (HPY00_23705) | 14008..15390 | - | 1383 | WP_001161719 | conjugal transfer pilus assembly protein TraH | traH |
| HPY00_RS23705 (HPY00_23710) | 15380..15928 | - | 549 | WP_000055840 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HPY00_RS23710 (HPY00_23715) | 15915..16208 | - | 294 | WP_001233881 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HPY00_RS23715 (HPY00_23720) | 16422..17171 | - | 750 | WP_001226854 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HPY00_RS23720 (HPY00_23725) | 17183..17398 | - | 216 | WP_000700023 | conjugal transfer protein TrbE | - |
| HPY00_RS23725 (HPY00_23730) | 17409..19235 | - | 1827 | WP_000827529 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HPY00_RS23730 (HPY00_23735) | 19232..19651 | - | 420 | WP_001229397 | HNH endonuclease | - |
| HPY00_RS23735 (HPY00_23740) | 19688..20326 | - | 639 | WP_000554823 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HPY00_RS23740 (HPY00_23745) | 20311..20619 | - | 309 | WP_010999945 | hypothetical protein | - |
| HPY00_RS23745 (HPY00_23750) | 20638..21630 | - | 993 | WP_000833320 | conjugal transfer pilus assembly protein TraU | traU |
| HPY00_RS23750 (HPY00_23755) | 21627..22226 | - | 600 | Protein_19 | type-F conjugative transfer system protein TraW | - |
| HPY00_RS23755 (HPY00_23760) | 22236..23444 | - | 1209 | WP_001339197 | IS4-like element ISVsa5 family transposase | - |
| HPY00_RS23760 (HPY00_23765) | 23594..23980 | - | 387 | WP_000105164 | type-F conjugative transfer system protein TrbI | - |
| HPY00_RS23765 (HPY00_23770) | 23955..26603 | - | 2649 | WP_000793310 | type IV secretion system protein TraC | virb4 |
| HPY00_RS23770 (HPY00_23775) | 26619..26882 | - | 264 | WP_001239255 | hypothetical protein | - |
| HPY00_RS23775 (HPY00_23780) | 26999..27466 | - | 468 | WP_000549562 | hypothetical protein | - |
| HPY00_RS23780 (HPY00_23785) | 27459..27680 | - | 222 | WP_001278699 | conjugal transfer protein TraR | - |
| HPY00_RS23785 (HPY00_23790) | 27815..28330 | - | 516 | WP_001079995 | type IV conjugative transfer system lipoprotein TraV | traV |
| HPY00_RS23790 (HPY00_23795) | 28327..28572 | - | 246 | WP_010999944 | DUF2689 domain-containing protein | virb4 |
| HPY00_RS23795 (HPY00_23800) | 28550..29146 | - | 597 | WP_000527897 | conjugal transfer pilus-stabilizing protein TraP | - |
| HPY00_RS23800 (HPY00_23805) | 29136..30557 | - | 1422 | WP_000146700 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HPY00_RS23805 (HPY00_23810) | 30557..31297 | - | 741 | WP_001230719 | type-F conjugative transfer system secretin TraK | traK |
| HPY00_RS23810 (HPY00_23815) | 31284..31850 | - | 567 | WP_000399768 | type IV conjugative transfer system protein TraE | traE |
| HPY00_RS23815 (HPY00_23820) | 31872..32183 | - | 312 | WP_000012129 | type IV conjugative transfer system protein TraL | traL |
| HPY00_RS23820 (HPY00_23825) | 32198..32560 | - | 363 | WP_001273051 | type IV conjugative transfer system pilin TraA | - |
| HPY00_RS23825 (HPY00_23830) | 32602..32829 | - | 228 | WP_001676655 | conjugal transfer relaxosome protein TraY | - |
| HPY00_RS23830 (HPY00_23835) | 32923..33609 | - | 687 | WP_000336297 | PAS domain-containing protein | - |
| HPY00_RS23835 (HPY00_23840) | 33802..34182 | - | 381 | WP_001151546 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HPY00_RS23840 (HPY00_23845) | 34597..35067 | + | 471 | WP_014344446 | transglycosylase SLT domain-containing protein | - |
| HPY00_RS23845 (HPY00_23850) | 35378..36196 | - | 819 | Protein_38 | DUF932 domain-containing protein | - |
| HPY00_RS23850 (HPY00_23855) | 36299..36457 | - | 159 | WP_001704449 | hypothetical protein | - |
| HPY00_RS25590 | 36543..36671 | - | 129 | WP_000372429 | hypothetical protein | - |