T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 54501..80956
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FF984_RS23975 (FF984_23975) | 49657..51654 | + | 1998 | WP_000117513 | ParB/RepB/Spo0J family partition protein | - |
| FF984_RS23980 (FF984_23980) | 51694..52128 | + | 435 | WP_010999943 | conjugation system SOS inhibitor PsiB | - |
| FF984_RS23985 (FF984_23985) | 52125..52862 | + | 738 | WP_000581933 | plasmid SOS inhibition protein A | - |
| FF984_RS24635 | 52897..53025 | + | 129 | WP_000372429 | hypothetical protein | - |
| FF984_RS24345 | 53111..53269 | + | 159 | WP_001704449 | hypothetical protein | - |
| FF984_RS24350 | 53372..54190 | + | 819 | Protein_68 | DUF932 domain-containing protein | - |
| FF984_RS24000 (FF984_24000) | 54501..54971 | - | 471 | WP_001526856 | transglycosylase SLT domain-containing protein | virB1 |
| FF984_RS24010 (FF984_24010) | 55386..55766 | + | 381 | WP_001151546 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| FF984_RS24015 (FF984_24015) | 55959..56645 | + | 687 | WP_000336297 | PAS domain-containing protein | - |
| FF984_RS24020 (FF984_24020) | 56739..56966 | + | 228 | WP_001676655 | conjugal transfer relaxosome protein TraY | - |
| FF984_RS24025 (FF984_24025) | 57008..57370 | + | 363 | WP_001274201 | type IV conjugative transfer system pilin TraA | - |
| FF984_RS24030 (FF984_24030) | 57385..57696 | + | 312 | WP_000012129 | type IV conjugative transfer system protein TraL | traL |
| FF984_RS24035 (FF984_24035) | 57718..58284 | + | 567 | WP_000399768 | type IV conjugative transfer system protein TraE | traE |
| FF984_RS24040 (FF984_24040) | 58271..59011 | + | 741 | WP_001230719 | type-F conjugative transfer system secretin TraK | traK |
| FF984_RS24045 (FF984_24045) | 59011..60432 | + | 1422 | WP_000146700 | F-type conjugal transfer pilus assembly protein TraB | traB |
| FF984_RS24050 (FF984_24050) | 60422..61018 | + | 597 | WP_000527896 | conjugal transfer pilus-stabilizing protein TraP | - |
| FF984_RS24055 (FF984_24055) | 60996..61241 | + | 246 | WP_010999944 | DUF2689 domain-containing protein | virb4 |
| FF984_RS24060 (FF984_24060) | 61238..61753 | + | 516 | WP_001079995 | type IV conjugative transfer system lipoprotein TraV | traV |
| FF984_RS24065 (FF984_24065) | 61888..62109 | + | 222 | WP_001278699 | conjugal transfer protein TraR | - |
| FF984_RS24070 (FF984_24070) | 62102..62569 | + | 468 | WP_000549562 | hypothetical protein | - |
| FF984_RS24075 (FF984_24075) | 62686..62949 | + | 264 | WP_001239256 | hypothetical protein | - |
| FF984_RS24080 (FF984_24080) | 62965..65613 | + | 2649 | WP_000793310 | type IV secretion system protein TraC | virb4 |
| FF984_RS24085 (FF984_24085) | 65588..65974 | + | 387 | WP_000105164 | type-F conjugative transfer system protein TrbI | - |
| FF984_RS24090 (FF984_24090) | 65971..66603 | + | 633 | WP_000871995 | type-F conjugative transfer system protein TraW | traW |
| FF984_RS24095 (FF984_24095) | 66600..67592 | + | 993 | WP_000833320 | conjugal transfer pilus assembly protein TraU | traU |
| FF984_RS24100 (FF984_24100) | 67611..67919 | + | 309 | WP_010999945 | hypothetical protein | - |
| FF984_RS24105 (FF984_24105) | 67904..68542 | + | 639 | WP_000554823 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| FF984_RS24110 (FF984_24110) | 68579..68998 | + | 420 | WP_001229397 | HNH endonuclease | - |
| FF984_RS24115 (FF984_24115) | 68995..70821 | + | 1827 | WP_000827528 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| FF984_RS24120 (FF984_24120) | 70832..71047 | + | 216 | WP_000700023 | conjugal transfer protein TrbE | - |
| FF984_RS24125 (FF984_24125) | 71059..71808 | + | 750 | WP_001226854 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| FF984_RS24130 (FF984_24130) | 72022..72315 | + | 294 | WP_001233881 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FF984_RS24135 (FF984_24135) | 72302..72850 | + | 549 | WP_000055840 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| FF984_RS24140 (FF984_24140) | 72840..74222 | + | 1383 | WP_001161719 | conjugal transfer pilus assembly protein TraH | traH |
| FF984_RS24145 (FF984_24145) | 74219..77041 | + | 2823 | WP_001007086 | conjugal transfer mating-pair stabilization protein TraG | traG |
| FF984_RS24150 (FF984_24150) | 77057..77551 | + | 495 | WP_010999946 | entry exclusion protein | - |
| FF984_RS24155 (FF984_24155) | 77587..78318 | + | 732 | WP_000782438 | conjugal transfer complement resistance protein TraT | - |
| FF984_RS24160 (FF984_24160) | 78695..80956 | + | 2262 | WP_015589607 | type IV conjugative transfer system coupling protein TraD | prgC |
| FF984_RS24165 (FF984_24165) | 80965..81363 | - | 399 | WP_000911322 | type II toxin-antitoxin system VapC family toxin | - |
| FF984_RS24170 (FF984_24170) | 81363..81590 | - | 228 | WP_000450265 | toxin-antitoxin system antitoxin VapB | - |