T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 50443..78916
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SM913_RS25850 (SM913_25850) | 50443..52755 | - | 2313 | WP_072101984 | type IV conjugative transfer system coupling protein TraD | virb4 |
| SM913_RS25855 (SM913_25855) | 52884..53573 | - | 690 | WP_072101983 | hypothetical protein | - |
| SM913_RS25860 (SM913_25860) | 53766..54497 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| SM913_RS25865 (SM913_25865) | 54683..55216 | - | 534 | WP_014343486 | conjugal transfer protein TraS | - |
| SM913_RS25870 (SM913_25870) | 55219..58068 | - | 2850 | WP_013609534 | conjugal transfer mating-pair stabilization protein TraG | traG |
| SM913_RS25875 (SM913_25875) | 58068..59447 | - | 1380 | WP_014343487 | conjugal transfer pilus assembly protein TraH | traH |
| SM913_RS25880 (SM913_25880) | 59425..59868 | - | 444 | WP_004194305 | F-type conjugal transfer protein TrbF | - |
| SM913_RS25885 (SM913_25885) | 59914..60471 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| SM913_RS25890 (SM913_25890) | 60443..60682 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| SM913_RS25895 (SM913_25895) | 60693..61445 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| SM913_RS25900 (SM913_25900) | 61466..61792 | - | 327 | WP_004152676 | hypothetical protein | - |
| SM913_RS25905 (SM913_25905) | 61805..62053 | - | 249 | WP_004152675 | hypothetical protein | - |
| SM913_RS25910 (SM913_25910) | 62031..62285 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| SM913_RS25915 (SM913_25915) | 62317..64272 | - | 1956 | WP_030003482 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| SM913_RS25920 (SM913_25920) | 64331..64969 | - | 639 | WP_069985712 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| SM913_RS25925 (SM913_25925) | 64982..65971 | - | 990 | WP_029497420 | conjugal transfer pilus assembly protein TraU | traU |
| SM913_RS25930 (SM913_25930) | 65968..66369 | - | 402 | WP_004194979 | hypothetical protein | - |
| SM913_RS25935 (SM913_25935) | 66404..67039 | - | 636 | WP_029497419 | type-F conjugative transfer system protein TraW | traW |
| SM913_RS25940 (SM913_25940) | 67039..67428 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| SM913_RS25945 (SM913_25945) | 67428..70067 | - | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| SM913_RS25950 (SM913_25950) | 70139..70537 | - | 399 | WP_023179972 | hypothetical protein | - |
| SM913_RS25955 (SM913_25955) | 70916..71320 | - | 405 | WP_004197817 | hypothetical protein | - |
| SM913_RS25960 (SM913_25960) | 71387..71698 | - | 312 | WP_094965623 | hypothetical protein | - |
| SM913_RS25965 (SM913_25965) | 71699..71917 | - | 219 | WP_004195468 | hypothetical protein | - |
| SM913_RS25970 (SM913_25970) | 72240..72824 | - | 585 | WP_032440547 | type IV conjugative transfer system lipoprotein TraV | traV |
| SM913_RS25975 (SM913_25975) | 72897..74321 | - | 1425 | WP_004194260 | F-type conjugal transfer pilus assembly protein TraB | traB |
| SM913_RS25980 (SM913_25980) | 74321..75061 | - | 741 | WP_013023821 | type-F conjugative transfer system secretin TraK | traK |
| SM913_RS25985 (SM913_25985) | 75048..75614 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| SM913_RS25990 (SM913_25990) | 75634..75939 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| SM913_RS25995 (SM913_25995) | 75953..76321 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| SM913_RS26000 (SM913_26000) | 76390..76590 | - | 201 | WP_004194116 | TraY domain-containing protein | - |
| SM913_RS26005 (SM913_26005) | 76676..77377 | - | 702 | WP_004194113 | hypothetical protein | - |
| SM913_RS26010 (SM913_26010) | 77607..77999 | - | 393 | WP_004194114 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| SM913_RS26015 (SM913_26015) | 78431..78916 | + | 486 | WP_032440470 | transglycosylase SLT domain-containing protein | virB1 |
| SM913_RS26020 (SM913_26020) | 78949..79278 | - | 330 | WP_071994324 | DUF5983 family protein | - |
| SM913_RS26025 (SM913_26025) | 79311..80132 | - | 822 | WP_023287138 | DUF932 domain-containing protein | - |
| SM913_RS26030 (SM913_26030) | 80962..81375 | - | 414 | WP_069985713 | type II toxin-antitoxin system HigA family antitoxin | - |
| SM913_RS26035 (SM913_26035) | 81376..81654 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| SM913_RS26040 (SM913_26040) | 81644..81964 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SM913_RS26045 (SM913_26045) | 82045..82269 | - | 225 | WP_014343499 | hypothetical protein | - |
| SM913_RS26050 (SM913_26050) | 82280..82492 | - | 213 | WP_019706020 | hypothetical protein | - |
| SM913_RS26055 (SM913_26055) | 82553..82909 | - | 357 | WP_019706019 | hypothetical protein | - |
| SM913_RS26060 (SM913_26060) | 83541..83891 | - | 351 | WP_023287104 | hypothetical protein | - |