T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1442..11767
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRV96_RS26740 (HRV96_26635) | 2..181 | - | 180 | Protein_0 | helix-turn-helix domain-containing protein | - |
| HRV96_RS27630 | 448..735 | + | 288 | Protein_1 | DUF6710 family protein | - |
| HRV96_RS26750 (HRV96_26645) | 909..1442 | - | 534 | WP_000792636 | phospholipase D family protein | - |
| HRV96_RS26755 (HRV96_26650) | 1442..2437 | - | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HRV96_RS26760 (HRV96_26655) | 2479..3639 | - | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| HRV96_RS26765 (HRV96_26660) | 3639..4523 | - | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| HRV96_RS26770 (HRV96_26665) | 4534..5232 | - | 699 | WP_000646594 | virB8 family protein | virB8 |
| HRV96_RS26775 (HRV96_26670) | 5451..6491 | - | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| HRV96_RS26780 (HRV96_26675) | 6507..6734 | - | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| HRV96_RS26785 (HRV96_26680) | 6742..7455 | - | 714 | WP_001749960 | type IV secretion system protein | virB5 |
| HRV96_RS26790 (HRV96_26685) | 7473..10073 | - | 2601 | WP_001749961 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HRV96_RS26795 (HRV96_26690) | 10073..10390 | - | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| HRV96_RS26800 (HRV96_26695) | 10440..10733 | - | 294 | WP_001749962 | hypothetical protein | virB2 |
| HRV96_RS26805 (HRV96_26700) | 10743..11024 | - | 282 | WP_000440698 | transcriptional repressor KorA | - |
| HRV96_RS26810 (HRV96_26705) | 11033..11767 | - | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| HRV96_RS26815 (HRV96_26710) | 11810..12181 | + | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| HRV96_RS26820 (HRV96_26715) | 12197..12541 | + | 345 | WP_001749964 | hypothetical protein | - |
| HRV96_RS26825 (HRV96_26720) | 12538..12852 | + | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HRV96_RS26830 (HRV96_26725) | 12888..13199 | + | 312 | WP_001452736 | hypothetical protein | - |
| HRV96_RS26835 (HRV96_26730) | 13249..13896 | + | 648 | WP_015344958 | restriction endonuclease | - |
| HRV96_RS26840 (HRV96_26735) | 13901..14107 | + | 207 | WP_001749967 | hypothetical protein | - |
| HRV96_RS26845 (HRV96_26740) | 14118..14390 | - | 273 | Protein_21 | IS1 family transposase | - |
| HRV96_RS26850 (HRV96_26745) | 14489..15922 | + | 1434 | WP_001288432 | DNA cytosine methyltransferase | - |