T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 64422..90351
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0F58_RS25370 (L0F58_25370) | 60467..60904 | + | 438 | WP_000539952 | type IV pilus biogenesis protein PilM | - |
| L0F58_RS25375 (L0F58_25375) | 60936..62555 | + | 1620 | WP_001035562 | PilN family type IVB pilus formation outer membrane protein | - |
| L0F58_RS25380 (L0F58_25380) | 62576..63871 | + | 1296 | WP_000129885 | type 4b pilus protein PilO2 | - |
| L0F58_RS25385 (L0F58_25385) | 63861..64319 | + | 459 | WP_000095887 | type IV pilus biogenesis protein PilP | - |
| L0F58_RS25390 (L0F58_25390) | 64422..65930 | + | 1509 | WP_000880806 | GspE/PulE family protein | virB11 |
| L0F58_RS25395 (L0F58_25395) | 65932..67026 | + | 1095 | WP_000697154 | type II secretion system F family protein | - |
| L0F58_RS25400 (L0F58_25400) | 67088..67624 | + | 537 | WP_000111521 | type 4 pilus major pilin | - |
| L0F58_RS25405 (L0F58_25405) | 67669..68154 | + | 486 | WP_001080767 | lytic transglycosylase domain-containing protein | virB1 |
| L0F58_RS25410 (L0F58_25410) | 68170..68796 | + | 627 | WP_013307883 | prepilin peptidase | - |
| L0F58_RS25415 (L0F58_25415) | 68814..70079 | + | 1266 | WP_013307882 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| L0F58_RS25420 (L0F58_25420) | 70363..70752 | + | 390 | Protein_80 | phage tail protein | - |
| L0F58_RS25425 (L0F58_25425) | 70757..70996 | - | 240 | WP_000271302 | hypothetical protein | - |
| L0F58_RS25430 (L0F58_25430) | 71672..72796 | + | 1125 | WP_013307880 | site-specific integrase | - |
| L0F58_RS25435 (L0F58_25435) | 73009..73830 | + | 822 | WP_001681675 | hypothetical protein | traE |
| L0F58_RS25440 (L0F58_25440) | 73932..75134 | + | 1203 | WP_013307879 | conjugal transfer protein TraF | - |
| L0F58_RS25445 (L0F58_25445) | 75238..75696 | + | 459 | WP_025750398 | DotD/TraH family lipoprotein | - |
| L0F58_RS25450 (L0F58_25450) | 75693..76529 | + | 837 | WP_000745049 | type IV secretory system conjugative DNA transfer family protein | traI |
| L0F58_RS25455 (L0F58_25455) | 76513..77661 | + | 1149 | WP_013307876 | plasmid transfer ATPase TraJ | virB11 |
| L0F58_RS25460 (L0F58_25460) | 77658..77948 | + | 291 | WP_000817801 | IcmT/TraK family protein | traK |
| L0F58_RS25465 (L0F58_25465) | 78360..79622 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| L0F58_RS25470 (L0F58_25470) | 79872..80747 | + | 876 | WP_001617865 | extended-spectrum class A beta-lactamase CTX-M-14 | - |
| L0F58_RS25475 (L0F58_25475) | 80782..81237 | + | 456 | Protein_91 | IS5 family transposase | - |
| L0F58_RS25480 (L0F58_25480) | 81245..81826 | + | 582 | WP_025750394 | hypothetical protein | - |
| L0F58_RS25485 (L0F58_25485) | 82180..86241 | + | 4062 | WP_013307874 | LPD7 domain-containing protein | - |
| L0F58_RS25490 (L0F58_25490) | 86258..86608 | + | 351 | WP_001056367 | hypothetical protein | traL |
| L0F58_RS25495 (L0F58_25495) | 86620..87315 | + | 696 | WP_001681668 | DotI/IcmL family type IV secretion protein | traM |
| L0F58_RS25500 (L0F58_25500) | 87326..88300 | + | 975 | WP_000547383 | DotH/IcmK family type IV secretion protein | traN |
| L0F58_RS25505 (L0F58_25505) | 88304..89641 | + | 1338 | WP_013307873 | conjugal transfer protein TraO | traO |
| L0F58_RS25510 (L0F58_25510) | 89638..90351 | + | 714 | WP_000787004 | conjugal transfer protein TraP | traP |