T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 542..19370
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0F58_RS25030 (L0F58_25030) | 542..940 | + | 399 | WP_000088813 | DUF6750 family protein | traR |
| L0F58_RS25605 | 997..1248 | + | 252 | WP_001277573 | hypothetical protein | - |
| L0F58_RS25040 (L0F58_25040) | 1163..1981 | + | 819 | WP_000753550 | hypothetical protein | traT |
| L0F58_RS25045 (L0F58_25045) | 2276..5320 | + | 3045 | WP_013307872 | conjugal transfer nucleotide-binding protein | traU |
| L0F58_RS25050 (L0F58_25050) | 5320..5940 | + | 621 | WP_000286854 | hypothetical protein | traV |
| L0F58_RS25055 (L0F58_25055) | 5898..7103 | + | 1206 | WP_001189548 | conjugal transfer protein TraW | traW |
| L0F58_RS25060 (L0F58_25060) | 7100..7669 | + | 570 | WP_000650752 | conjugal transfer protein TraX | - |
| L0F58_RS25065 (L0F58_25065) | 7744..9909 | + | 2166 | WP_000691808 | DotA/TraY family protein | traY |
| L0F58_RS25070 (L0F58_25070) | 9997..10650 | + | 654 | WP_001401768 | plasmid IncI1-type surface exclusion protein ExcA | - |
| L0F58_RS25075 (L0F58_25075) | 10924..12510 | + | 1587 | WP_000004564 | TnsA endonuclease N-terminal domain-containing protein | - |
| L0F58_RS25080 (L0F58_25080) | 12648..12800 | - | 153 | WP_001302699 | Hok/Gef family protein | - |
| L0F58_RS25085 (L0F58_25085) | 13130..13372 | + | 243 | WP_000650923 | hypothetical protein | - |
| L0F58_RS25090 (L0F58_25090) | 13663..14031 | + | 369 | WP_001345852 | hypothetical protein | - |
| L0F58_RS25095 (L0F58_25095) | 14035..14250 | + | 216 | WP_000266543 | hypothetical protein | - |
| L0F58_RS25100 (L0F58_25100) | 14448..15071 | - | 624 | WP_001155247 | helix-turn-helix domain-containing protein | - |
| L0F58_RS25105 (L0F58_25105) | 15230..15697 | + | 468 | WP_000598962 | thermonuclease family protein | - |
| L0F58_RS25110 (L0F58_25110) | 15847..16023 | + | 177 | WP_001054907 | hypothetical protein | - |
| L0F58_RS25610 | 16086..16181 | - | 96 | WP_001363141 | DinQ-like type I toxin DqlB | - |
| L0F58_RS25120 (L0F58_25120) | 16978..18249 | + | 1272 | WP_044810582 | IncI1-type conjugal transfer protein TrbA | trbA |
| L0F58_RS25125 (L0F58_25125) | 18246..19370 | + | 1125 | WP_000152382 | DsbC family protein | trbB |
| L0F58_RS25130 (L0F58_25130) | 19351..21651 | + | 2301 | WP_013307869 | F-type conjugative transfer protein TrbC | - |