T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 56227..81790
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEEP9120_RS22925 (SEEP9120_022970) | 56227..58461 | - | 2235 | WP_001747308 | type IV conjugative transfer system coupling protein TraD | virb4 |
| SEEP9120_RS22930 (SEEP9120_022975) | 58838..59569 | - | 732 | WP_000850404 | conjugal transfer complement resistance protein TraT | - |
| SEEP9120_RS22935 (SEEP9120_022980) | 59815..60297 | - | 483 | WP_000787664 | hypothetical protein | - |
| SEEP9120_RS26095 | 61534..62805 | - | 1272 | Protein_75 | conjugal transfer pilus assembly protein TraH | - |
| SEEP9120_RS22945 (SEEP9120_022990) | 62795..63343 | - | 549 | WP_000055842 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| SEEP9120_RS22950 (SEEP9120_022995) | 63330..63623 | - | 294 | WP_001233883 | type-F conjugative transfer system pilin chaperone TraQ | - |
| SEEP9120_RS22955 (SEEP9120_023000) | 63837..64580 | - | 744 | WP_001746545 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| SEEP9120_RS22960 (SEEP9120_023005) | 64593..64808 | - | 216 | WP_001746544 | conjugal transfer protein TrbE | - |
| SEEP9120_RS22965 (SEEP9120_023010) | 64819..65295 | - | 477 | WP_001746543 | hypothetical protein | - |
| SEEP9120_RS22970 (SEEP9120_023015) | 65306..67132 | - | 1827 | WP_001746541 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| SEEP9120_RS22975 (SEEP9120_023020) | 67129..67548 | - | 420 | WP_001229398 | HNH endonuclease | - |
| SEEP9120_RS22980 (SEEP9120_023025) | 67585..68223 | - | 639 | WP_001576661 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| SEEP9120_RS22985 (SEEP9120_023030) | 68208..68516 | - | 309 | WP_001576663 | hypothetical protein | - |
| SEEP9120_RS22990 (SEEP9120_023035) | 68535..69527 | - | 993 | WP_015059450 | conjugal transfer pilus assembly protein TraU | traU |
| SEEP9120_RS22995 (SEEP9120_023040) | 69524..70156 | - | 633 | WP_015059451 | type-F conjugative transfer system protein TraW | traW |
| SEEP9120_RS23000 (SEEP9120_023045) | 70153..70539 | - | 387 | WP_000102756 | type-F conjugative transfer system protein TrbI | - |
| SEEP9120_RS23005 (SEEP9120_023050) | 70514..73161 | - | 2648 | Protein_88 | type IV secretion system protein TraC | - |
| SEEP9120_RS23010 (SEEP9120_023055) | 73177..73560 | - | 384 | WP_000870325 | hypothetical protein | - |
| SEEP9120_RS23015 (SEEP9120_023060) | 73557..74024 | - | 468 | WP_000549559 | hypothetical protein | - |
| SEEP9120_RS23020 (SEEP9120_023065) | 74017..74238 | - | 222 | WP_001278699 | conjugal transfer protein TraR | - |
| SEEP9120_RS23025 (SEEP9120_023070) | 74373..74888 | - | 516 | WP_001746951 | type IV conjugative transfer system lipoprotein TraV | traV |
| SEEP9120_RS23030 (SEEP9120_023075) | 74885..75109 | - | 225 | WP_001746950 | DUF2689 domain-containing protein | - |
| SEEP9120_RS23035 (SEEP9120_023080) | 75087..75683 | - | 597 | WP_000527898 | conjugal transfer pilus-stabilizing protein TraP | - |
| SEEP9120_RS23040 (SEEP9120_023085) | 75673..77094 | - | 1422 | WP_000146698 | F-type conjugal transfer pilus assembly protein TraB | traB |
| SEEP9120_RS23045 (SEEP9120_023090) | 77094..77834 | - | 741 | WP_015059453 | type-F conjugative transfer system secretin TraK | traK |
| SEEP9120_RS23050 (SEEP9120_023095) | 77821..78387 | - | 567 | WP_000399760 | type IV conjugative transfer system protein TraE | traE |
| SEEP9120_RS23055 (SEEP9120_023100) | 78409..78720 | - | 312 | WP_000012129 | type IV conjugative transfer system protein TraL | traL |
| SEEP9120_RS23060 (SEEP9120_023105) | 78735..79097 | - | 363 | WP_001274202 | type IV conjugative transfer system pilin TraA | - |
| SEEP9120_RS24615 | 79139..79534 | - | 396 | WP_001746564 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| SEEP9120_RS23070 (SEEP9120_023115) | 79633..80322 | - | 690 | WP_001746563 | conjugal transfer transcriptional regulator TraJ | - |
| SEEP9120_RS23075 (SEEP9120_023120) | 80517..80897 | - | 381 | WP_001151568 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| SEEP9120_RS23080 (SEEP9120_023125) | 81320..81790 | + | 471 | WP_024134052 | transglycosylase SLT domain-containing protein | virB1 |
| SEEP9120_RS25720 | 82101..82919 | - | 819 | Protein_104 | DUF932 domain-containing protein | - |
| SEEP9120_RS25610 | 83022..83180 | - | 159 | WP_001704449 | hypothetical protein | - |
| SEEP9120_RS26165 | 83266..83394 | - | 129 | WP_001746558 | hypothetical protein | - |
| SEEP9120_RS23095 (SEEP9120_023140) | 83429..84085 | - | 657 | Protein_107 | plasmid SOS inhibition protein A | - |
| SEEP9120_RS23100 (SEEP9120_023145) | 84079..84213 | - | 135 | Protein_108 | conjugation system SOS inhibitor PsiB family protein | - |
| SEEP9120_RS23105 (SEEP9120_023150) | 84253..86236 | - | 1984 | Protein_109 | ParB/RepB/Spo0J family partition protein | - |
| SEEP9120_RS24625 | 86305..86445 | - | 141 | Protein_110 | DUF905 family protein | - |