T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 16195..27515
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEEN462_RS00590 (SEEN462_00665) | 15380..16087 | + | 708 | WP_001259346 | DsbC family protein | - |
| SEEN462_RS00595 (SEEN462_00670) | 16195..16791 | + | 597 | WP_232166453 | conjugal transfer protein TraC | virb4 |
| SEEN462_RS00600 | 16785..17744 | - | 960 | Protein_14 | IS1380-like element ISEcp1 family transposase | - |
| SEEN462_RS00605 (SEEN462_00680) | 18029..18421 | - | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| SEEN462_RS00610 (SEEN462_00685) | 18425..19003 | - | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| SEEN462_RS00615 (SEEN462_00690) | 19000..20313 | - | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| SEEN462_RS00620 (SEEN462_00695) | 20313..21230 | - | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| SEEN462_RS00625 (SEEN462_00700) | 21214..21840 | - | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| SEEN462_RS00630 (SEEN462_00705) | 21837..22118 | - | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| SEEN462_RS00635 (SEEN462_00710) | 22263..22628 | - | 366 | WP_001052530 | hypothetical protein | - |
| SEEN462_RS00640 (SEEN462_00720) | 22964..23626 | - | 663 | WP_001231464 | hypothetical protein | - |
| SEEN462_RS00645 (SEEN462_00725) | 23626..24003 | - | 378 | WP_000869297 | hypothetical protein | - |
| SEEN462_RS00650 (SEEN462_00730) | 24013..24459 | - | 447 | WP_000122507 | hypothetical protein | - |
| SEEN462_RS00655 (SEEN462_00735) | 24469..25098 | - | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| SEEN462_RS00660 (SEEN462_00740) | 25055..25600 | - | 546 | WP_000228720 | hypothetical protein | - |
| SEEN462_RS00665 (SEEN462_00745) | 25650..27515 | - | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| SEEN462_RS25225 (SEEN462_00750) | 27512..30484 | - | 2973 | WP_001326173 | MobH family relaxase | - |
| SEEN462_RS00675 (SEEN462_00755) | 30652..31269 | + | 618 | WP_001249395 | hypothetical protein | - |
| SEEN462_RS00680 (SEEN462_00760) | 31251..31484 | + | 234 | WP_001191890 | hypothetical protein | - |