T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 71441..100260
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SM912_RS25795 (SM912_25795) | 71441..73753 | - | 2313 | WP_013023832 | type IV conjugative transfer system coupling protein TraD | virb4 |
| SM912_RS25800 (SM912_25800) | 73880..74569 | - | 690 | WP_013023831 | hypothetical protein | - |
| SM912_RS25805 (SM912_25805) | 74762..75493 | - | 732 | WP_013023830 | conjugal transfer complement resistance protein TraT | - |
| SM912_RS25810 (SM912_25810) | 75679..76212 | - | 534 | WP_014343486 | conjugal transfer protein TraS | - |
| SM912_RS25815 (SM912_25815) | 76215..79064 | - | 2850 | WP_013609534 | conjugal transfer mating-pair stabilization protein TraG | traG |
| SM912_RS25820 (SM912_25820) | 79064..80443 | - | 1380 | WP_014343487 | conjugal transfer pilus assembly protein TraH | traH |
| SM912_RS25825 (SM912_25825) | 80421..80864 | - | 444 | WP_013023828 | F-type conjugal transfer protein TrbF | - |
| SM912_RS25830 (SM912_25830) | 80910..81467 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| SM912_RS25835 (SM912_25835) | 81439..81678 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| SM912_RS25840 (SM912_25840) | 81689..82441 | - | 753 | WP_048337413 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| SM912_RS25845 (SM912_25845) | 82462..82788 | - | 327 | WP_004152676 | hypothetical protein | - |
| SM912_RS25850 (SM912_25850) | 82801..83049 | - | 249 | WP_004152675 | hypothetical protein | - |
| SM912_RS25855 (SM912_25855) | 83027..83281 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| SM912_RS25860 (SM912_25860) | 83313..85268 | - | 1956 | WP_013023827 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| SM912_RS25865 (SM912_25865) | 85327..85965 | - | 639 | WP_011977786 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| SM912_RS25870 (SM912_25870) | 85978..86967 | - | 990 | WP_009309872 | conjugal transfer pilus assembly protein TraU | traU |
| SM912_RS25875 (SM912_25875) | 86964..87353 | - | 390 | WP_004194992 | hypothetical protein | - |
| SM912_RS25880 (SM912_25880) | 87395..88021 | - | 627 | WP_009309871 | type-F conjugative transfer system protein TraW | traW |
| SM912_RS25885 (SM912_25885) | 88021..88410 | - | 390 | WP_004197815 | type-F conjugative transfer system protein TrbI | - |
| SM912_RS25890 (SM912_25890) | 88410..91049 | - | 2640 | WP_013023824 | type IV secretion system protein TraC | virb4 |
| SM912_RS25895 (SM912_25895) | 91121..91519 | - | 399 | WP_013609531 | hypothetical protein | - |
| SM912_RS25900 (SM912_25900) | 91895..92299 | - | 405 | WP_004197817 | hypothetical protein | - |
| SM912_RS25905 (SM912_25905) | 92366..92677 | - | 312 | WP_015344986 | hypothetical protein | - |
| SM912_RS25910 (SM912_25910) | 92678..92896 | - | 219 | WP_015344987 | hypothetical protein | - |
| SM912_RS25915 (SM912_25915) | 93002..93412 | - | 411 | WP_009309869 | hypothetical protein | - |
| SM912_RS25920 (SM912_25920) | 93544..94128 | - | 585 | WP_013023822 | type IV conjugative transfer system lipoprotein TraV | traV |
| SM912_RS25925 (SM912_25925) | 94242..95666 | - | 1425 | WP_004194260 | F-type conjugal transfer pilus assembly protein TraB | traB |
| SM912_RS25930 (SM912_25930) | 95666..96406 | - | 741 | WP_013023821 | type-F conjugative transfer system secretin TraK | traK |
| SM912_RS25935 (SM912_25935) | 96393..96959 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| SM912_RS25940 (SM912_25940) | 96979..97284 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| SM912_RS25945 (SM912_25945) | 97298..97666 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| SM912_RS25950 (SM912_25950) | 97735..97935 | - | 201 | WP_004194116 | TraY domain-containing protein | - |
| SM912_RS25955 (SM912_25955) | 98098..98721 | - | 624 | WP_228264842 | hypothetical protein | - |
| SM912_RS25960 (SM912_25960) | 98951..99343 | - | 393 | WP_004194114 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| SM912_RS25965 (SM912_25965) | 99775..100260 | + | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| SM912_RS25970 (SM912_25970) | 100293..100622 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| SM912_RS25975 (SM912_25975) | 100655..101476 | - | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| SM912_RS25980 (SM912_25980) | 101780..101956 | - | 177 | WP_074421342 | hypothetical protein | - |
| SM912_RS25985 (SM912_25985) | 102284..103492 | + | 1209 | WP_015344990 | IS256 family transposase | - |
| SM912_RS25990 (SM912_25990) | 103628..104041 | - | 414 | WP_013023817 | type II toxin-antitoxin system HigA family antitoxin | - |
| SM912_RS25995 (SM912_25995) | 104042..104320 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| SM912_RS26000 (SM912_26000) | 104310..104630 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SM912_RS26005 (SM912_26005) | 104711..104935 | - | 225 | WP_004152719 | hypothetical protein | - |
| SM912_RS26010 (SM912_26010) | 104946..105158 | - | 213 | WP_013023815 | hypothetical protein | - |