T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 55812..84285
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SM906_RS25300 (SM906_25300) | 50837..51187 | + | 351 | WP_023287104 | hypothetical protein | - |
| SM906_RS25305 (SM906_25305) | 51819..52175 | + | 357 | WP_019706019 | hypothetical protein | - |
| SM906_RS25310 (SM906_25310) | 52236..52448 | + | 213 | WP_019706020 | hypothetical protein | - |
| SM906_RS25315 (SM906_25315) | 52459..52683 | + | 225 | WP_014343499 | hypothetical protein | - |
| SM906_RS25320 (SM906_25320) | 52764..53084 | + | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SM906_RS25325 (SM906_25325) | 53074..53352 | + | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| SM906_RS25330 (SM906_25330) | 53353..53766 | + | 414 | WP_069985713 | type II toxin-antitoxin system HigA family antitoxin | - |
| SM906_RS25335 (SM906_25335) | 54596..55417 | + | 822 | WP_023287138 | DUF932 domain-containing protein | - |
| SM906_RS25340 (SM906_25340) | 55450..55779 | + | 330 | WP_071994324 | DUF5983 family protein | - |
| SM906_RS25345 (SM906_25345) | 55812..56297 | - | 486 | WP_032440470 | transglycosylase SLT domain-containing protein | virB1 |
| SM906_RS25350 (SM906_25350) | 56729..57121 | + | 393 | WP_004194114 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| SM906_RS25355 (SM906_25355) | 57351..58052 | + | 702 | WP_004194113 | hypothetical protein | - |
| SM906_RS25360 (SM906_25360) | 58138..58338 | + | 201 | WP_004194116 | TraY domain-containing protein | - |
| SM906_RS25365 (SM906_25365) | 58407..58775 | + | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| SM906_RS25370 (SM906_25370) | 58789..59094 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| SM906_RS25375 (SM906_25375) | 59114..59680 | + | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| SM906_RS25380 (SM906_25380) | 59667..60407 | + | 741 | WP_013023821 | type-F conjugative transfer system secretin TraK | traK |
| SM906_RS25385 (SM906_25385) | 60407..61831 | + | 1425 | WP_004194260 | F-type conjugal transfer pilus assembly protein TraB | traB |
| SM906_RS25390 (SM906_25390) | 61904..62488 | + | 585 | WP_032440547 | type IV conjugative transfer system lipoprotein TraV | traV |
| SM906_RS25395 (SM906_25395) | 62811..63029 | + | 219 | WP_004195468 | hypothetical protein | - |
| SM906_RS25400 (SM906_25400) | 63030..63341 | + | 312 | WP_029497417 | hypothetical protein | - |
| SM906_RS25405 (SM906_25405) | 63408..63812 | + | 405 | WP_004197817 | hypothetical protein | - |
| SM906_RS25410 (SM906_25410) | 64191..64589 | + | 399 | WP_023179972 | hypothetical protein | - |
| SM906_RS25415 (SM906_25415) | 64661..67300 | + | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| SM906_RS25420 (SM906_25420) | 67300..67689 | + | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| SM906_RS25425 (SM906_25425) | 67689..68324 | + | 636 | WP_029497419 | type-F conjugative transfer system protein TraW | traW |
| SM906_RS25430 (SM906_25430) | 68359..68760 | + | 402 | WP_004194979 | hypothetical protein | - |
| SM906_RS25435 (SM906_25435) | 68757..69746 | + | 990 | WP_029497420 | conjugal transfer pilus assembly protein TraU | traU |
| SM906_RS25440 (SM906_25440) | 69759..70397 | + | 639 | WP_069985712 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| SM906_RS25445 (SM906_25445) | 70456..72411 | + | 1956 | WP_030003482 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| SM906_RS25450 (SM906_25450) | 72443..72697 | + | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| SM906_RS25455 (SM906_25455) | 72675..72923 | + | 249 | WP_004152675 | hypothetical protein | - |
| SM906_RS25460 (SM906_25460) | 72936..73262 | + | 327 | WP_004152676 | hypothetical protein | - |
| SM906_RS25465 (SM906_25465) | 73283..74035 | + | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| SM906_RS25470 (SM906_25470) | 74046..74285 | + | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| SM906_RS25475 (SM906_25475) | 74257..74814 | + | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| SM906_RS25480 (SM906_25480) | 74860..75303 | + | 444 | WP_004194305 | F-type conjugal transfer protein TrbF | - |
| SM906_RS25485 (SM906_25485) | 75281..76660 | + | 1380 | WP_014343487 | conjugal transfer pilus assembly protein TraH | traH |
| SM906_RS25490 (SM906_25490) | 76660..79509 | + | 2850 | WP_013609534 | conjugal transfer mating-pair stabilization protein TraG | traG |
| SM906_RS25495 (SM906_25495) | 79512..80045 | + | 534 | WP_014343486 | conjugal transfer protein TraS | - |
| SM906_RS25500 (SM906_25500) | 80231..80962 | + | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| SM906_RS25505 (SM906_25505) | 81155..81844 | + | 690 | WP_072101983 | hypothetical protein | - |
| SM906_RS25510 (SM906_25510) | 81973..84285 | + | 2313 | WP_072101984 | type IV conjugative transfer system coupling protein TraD | virb4 |