T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 56435..84908
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SM904_RS25440 (SM904_25440) | 56435..58747 | - | 2313 | WP_072101984 | type IV conjugative transfer system coupling protein TraD | virb4 |
| SM904_RS25445 (SM904_25445) | 58876..59565 | - | 690 | WP_072101983 | hypothetical protein | - |
| SM904_RS25450 (SM904_25450) | 59758..60489 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| SM904_RS25455 (SM904_25455) | 60675..61208 | - | 534 | WP_014343486 | conjugal transfer protein TraS | - |
| SM904_RS25460 (SM904_25460) | 61211..64060 | - | 2850 | WP_013609534 | conjugal transfer mating-pair stabilization protein TraG | traG |
| SM904_RS25465 (SM904_25465) | 64060..65439 | - | 1380 | WP_014343487 | conjugal transfer pilus assembly protein TraH | traH |
| SM904_RS25470 (SM904_25470) | 65417..65860 | - | 444 | WP_004194305 | F-type conjugal transfer protein TrbF | - |
| SM904_RS25475 (SM904_25475) | 65906..66463 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| SM904_RS25480 (SM904_25480) | 66435..66674 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| SM904_RS25485 (SM904_25485) | 66685..67437 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| SM904_RS25490 (SM904_25490) | 67458..67784 | - | 327 | WP_004152676 | hypothetical protein | - |
| SM904_RS25495 (SM904_25495) | 67797..68045 | - | 249 | WP_004152675 | hypothetical protein | - |
| SM904_RS25500 (SM904_25500) | 68023..68277 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| SM904_RS25505 (SM904_25505) | 68309..70264 | - | 1956 | WP_030003482 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| SM904_RS25510 (SM904_25510) | 70323..70961 | - | 639 | WP_069985712 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| SM904_RS25515 (SM904_25515) | 70974..71963 | - | 990 | WP_029497420 | conjugal transfer pilus assembly protein TraU | traU |
| SM904_RS25520 (SM904_25520) | 71960..72361 | - | 402 | WP_004194979 | hypothetical protein | - |
| SM904_RS25525 (SM904_25525) | 72396..73031 | - | 636 | WP_029497419 | type-F conjugative transfer system protein TraW | traW |
| SM904_RS25530 (SM904_25530) | 73031..73420 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| SM904_RS25535 (SM904_25535) | 73420..76059 | - | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| SM904_RS25540 (SM904_25540) | 76131..76529 | - | 399 | WP_023179972 | hypothetical protein | - |
| SM904_RS25545 (SM904_25545) | 76908..77312 | - | 405 | WP_004197817 | hypothetical protein | - |
| SM904_RS25550 (SM904_25550) | 77379..77690 | - | 312 | WP_320896797 | hypothetical protein | - |
| SM904_RS25555 (SM904_25555) | 77691..77909 | - | 219 | WP_004195468 | hypothetical protein | - |
| SM904_RS25560 (SM904_25560) | 78232..78816 | - | 585 | WP_032440547 | type IV conjugative transfer system lipoprotein TraV | traV |
| SM904_RS25565 (SM904_25565) | 78889..80313 | - | 1425 | WP_004194260 | F-type conjugal transfer pilus assembly protein TraB | traB |
| SM904_RS25570 (SM904_25570) | 80313..81053 | - | 741 | WP_013023821 | type-F conjugative transfer system secretin TraK | traK |
| SM904_RS25575 (SM904_25575) | 81040..81606 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| SM904_RS25580 (SM904_25580) | 81626..81931 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| SM904_RS25585 (SM904_25585) | 81945..82313 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| SM904_RS25590 (SM904_25590) | 82382..82582 | - | 201 | WP_004194116 | TraY domain-containing protein | - |
| SM904_RS25595 (SM904_25595) | 82668..83369 | - | 702 | WP_004194113 | hypothetical protein | - |
| SM904_RS25600 (SM904_25600) | 83599..83991 | - | 393 | WP_004194114 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| SM904_RS25605 (SM904_25605) | 84423..84908 | + | 486 | WP_032440470 | transglycosylase SLT domain-containing protein | virB1 |
| SM904_RS25610 (SM904_25610) | 84941..85270 | - | 330 | WP_071994324 | DUF5983 family protein | - |
| SM904_RS25615 (SM904_25615) | 85303..86124 | - | 822 | WP_023287138 | DUF932 domain-containing protein | - |
| SM904_RS25620 (SM904_25620) | 86954..87367 | - | 414 | WP_069985713 | type II toxin-antitoxin system HigA family antitoxin | - |
| SM904_RS25625 (SM904_25625) | 87368..87646 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| SM904_RS25630 (SM904_25630) | 87636..87956 | - | 321 | WP_320896798 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SM904_RS25635 (SM904_25635) | 88037..88261 | - | 225 | WP_014343499 | hypothetical protein | - |
| SM904_RS25640 (SM904_25640) | 88272..88484 | - | 213 | WP_019706020 | hypothetical protein | - |
| SM904_RS25645 (SM904_25645) | 88545..88901 | - | 357 | WP_019706019 | hypothetical protein | - |
| SM904_RS25650 (SM904_25650) | 89533..89883 | - | 351 | WP_023287104 | hypothetical protein | - |