T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 49818..78291
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SM788_RS25275 (SM788_25275) | 49818..52130 | - | 2313 | WP_072101984 | type IV conjugative transfer system coupling protein TraD | virb4 |
| SM788_RS25280 (SM788_25280) | 52259..52948 | - | 690 | WP_072101983 | hypothetical protein | - |
| SM788_RS25285 (SM788_25285) | 53141..53872 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| SM788_RS25290 (SM788_25290) | 54058..54591 | - | 534 | WP_014343486 | conjugal transfer protein TraS | - |
| SM788_RS25295 (SM788_25295) | 54594..57443 | - | 2850 | WP_013609534 | conjugal transfer mating-pair stabilization protein TraG | traG |
| SM788_RS25300 (SM788_25300) | 57443..58822 | - | 1380 | WP_014343487 | conjugal transfer pilus assembly protein TraH | traH |
| SM788_RS25305 (SM788_25305) | 58800..59243 | - | 444 | WP_004194305 | F-type conjugal transfer protein TrbF | - |
| SM788_RS25310 (SM788_25310) | 59289..59846 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| SM788_RS25315 (SM788_25315) | 59818..60057 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| SM788_RS25320 (SM788_25320) | 60068..60820 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| SM788_RS25325 (SM788_25325) | 60841..61167 | - | 327 | WP_004152676 | hypothetical protein | - |
| SM788_RS25330 (SM788_25330) | 61180..61428 | - | 249 | WP_004152675 | hypothetical protein | - |
| SM788_RS25335 (SM788_25335) | 61406..61660 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| SM788_RS25340 (SM788_25340) | 61692..63647 | - | 1956 | WP_030003482 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| SM788_RS25345 (SM788_25345) | 63706..64344 | - | 639 | WP_069985712 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| SM788_RS25350 (SM788_25350) | 64357..65346 | - | 990 | WP_029497420 | conjugal transfer pilus assembly protein TraU | traU |
| SM788_RS25355 (SM788_25355) | 65343..65744 | - | 402 | WP_004194979 | hypothetical protein | - |
| SM788_RS25360 (SM788_25360) | 65779..66414 | - | 636 | WP_029497419 | type-F conjugative transfer system protein TraW | traW |
| SM788_RS25365 (SM788_25365) | 66414..66803 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| SM788_RS25370 (SM788_25370) | 66803..69442 | - | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| SM788_RS25375 (SM788_25375) | 69514..69912 | - | 399 | WP_023179972 | hypothetical protein | - |
| SM788_RS25380 (SM788_25380) | 70291..70695 | - | 405 | WP_004197817 | hypothetical protein | - |
| SM788_RS25385 (SM788_25385) | 70762..71073 | - | 312 | WP_094965623 | hypothetical protein | - |
| SM788_RS25390 (SM788_25390) | 71074..71292 | - | 219 | WP_004195468 | hypothetical protein | - |
| SM788_RS25395 (SM788_25395) | 71615..72199 | - | 585 | WP_032440547 | type IV conjugative transfer system lipoprotein TraV | traV |
| SM788_RS25400 (SM788_25400) | 72272..73696 | - | 1425 | WP_004194260 | F-type conjugal transfer pilus assembly protein TraB | traB |
| SM788_RS25405 (SM788_25405) | 73696..74436 | - | 741 | WP_013023821 | type-F conjugative transfer system secretin TraK | traK |
| SM788_RS25410 (SM788_25410) | 74423..74989 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| SM788_RS25415 (SM788_25415) | 75009..75314 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| SM788_RS25420 (SM788_25420) | 75328..75696 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| SM788_RS25425 (SM788_25425) | 75765..75965 | - | 201 | WP_004194116 | TraY domain-containing protein | - |
| SM788_RS25430 (SM788_25430) | 76051..76752 | - | 702 | WP_004194113 | hypothetical protein | - |
| SM788_RS25435 (SM788_25435) | 76982..77374 | - | 393 | WP_004194114 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| SM788_RS25440 (SM788_25440) | 77806..78291 | + | 486 | WP_032440470 | transglycosylase SLT domain-containing protein | virB1 |
| SM788_RS25445 (SM788_25445) | 78324..78653 | - | 330 | WP_071994324 | DUF5983 family protein | - |
| SM788_RS25450 (SM788_25450) | 78686..79507 | - | 822 | WP_023287138 | DUF932 domain-containing protein | - |
| SM788_RS25455 (SM788_25455) | 80337..80750 | - | 414 | WP_069985713 | type II toxin-antitoxin system HigA family antitoxin | - |
| SM788_RS25460 (SM788_25460) | 80751..81029 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| SM788_RS25465 (SM788_25465) | 81019..81339 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SM788_RS25470 (SM788_25470) | 81420..81644 | - | 225 | WP_014343499 | hypothetical protein | - |
| SM788_RS25475 (SM788_25475) | 81655..81867 | - | 213 | WP_019706020 | hypothetical protein | - |
| SM788_RS25480 (SM788_25480) | 81928..82284 | - | 357 | WP_019706019 | hypothetical protein | - |
| SM788_RS25485 (SM788_25485) | 82916..83266 | - | 351 | WP_023287104 | hypothetical protein | - |