T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 36835..65023
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SM789_RS24955 (SM789_24955) | 32807..33241 | + | 435 | WP_000845953 | conjugation system SOS inhibitor PsiB | - |
| SM789_RS24960 (SM789_24960) | 33238..33957 | + | 720 | WP_001276217 | plasmid SOS inhibition protein A | - |
| SM789_RS24965 (SM789_24965) | 34179..34328 | + | 150 | Protein_44 | plasmid maintenance protein Mok | - |
| SM789_RS24970 (SM789_24970) | 34270..34395 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| SM789_RS24975 (SM789_24975) | 34714..35010 | - | 297 | Protein_46 | hypothetical protein | - |
| SM789_RS24980 (SM789_24980) | 35310..35606 | + | 297 | WP_001272251 | hypothetical protein | - |
| SM789_RS24985 (SM789_24985) | 35717..36538 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| SM789_RS24990 (SM789_24990) | 36835..37482 | - | 648 | WP_015059008 | transglycosylase SLT domain-containing protein | virB1 |
| SM789_RS24995 (SM789_24995) | 37759..38142 | + | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| SM789_RS25000 (SM789_25000) | 38333..39019 | + | 687 | WP_015059009 | PAS domain-containing protein | - |
| SM789_RS25005 (SM789_25005) | 39113..39340 | + | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| SM789_RS25010 (SM789_25010) | 39374..39739 | + | 366 | WP_021519752 | type IV conjugative transfer system pilin TraA | - |
| SM789_RS25015 (SM789_25015) | 39754..40065 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| SM789_RS25020 (SM789_25020) | 40087..40653 | + | 567 | WP_000399794 | type IV conjugative transfer system protein TraE | traE |
| SM789_RS25025 (SM789_25025) | 40640..41368 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| SM789_RS25030 (SM789_25030) | 41368..42795 | + | 1428 | WP_032297072 | F-type conjugal transfer pilus assembly protein TraB | traB |
| SM789_RS25035 (SM789_25035) | 42785..43375 | + | 591 | WP_000002778 | conjugal transfer pilus-stabilizing protein TraP | - |
| SM789_RS25040 (SM789_25040) | 43362..43559 | + | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| SM789_RS25045 (SM789_25045) | 43571..43822 | + | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| SM789_RS25050 (SM789_25050) | 43819..44334 | + | 516 | WP_062955122 | type IV conjugative transfer system lipoprotein TraV | traV |
| SM789_RS25055 (SM789_25055) | 44469..44690 | + | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| SM789_RS25060 (SM789_25060) | 44850..47477 | + | 2628 | WP_015059012 | type IV secretion system protein TraC | virb4 |
| SM789_RS25065 (SM789_25065) | 47474..47860 | + | 387 | WP_015059013 | type-F conjugative transfer system protein TrbI | - |
| SM789_RS25070 (SM789_25070) | 47857..48489 | + | 633 | WP_001203735 | type-F conjugative transfer system protein TraW | traW |
| SM789_RS25075 (SM789_25075) | 48486..49478 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| SM789_RS25080 (SM789_25080) | 49505..49813 | + | 309 | WP_000412447 | hypothetical protein | - |
| SM789_RS25085 (SM789_25085) | 49876..50397 | + | 522 | WP_015059014 | hypothetical protein | - |
| SM789_RS25090 (SM789_25090) | 50424..51062 | + | 639 | WP_000087532 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| SM789_RS25095 (SM789_25095) | 51059..51430 | + | 372 | WP_000056336 | hypothetical protein | - |
| SM789_RS25100 (SM789_25100) | 51456..51878 | + | 423 | WP_001229309 | HNH endonuclease | - |
| SM789_RS25105 (SM789_25105) | 51875..53725 | + | 1851 | WP_015059015 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| SM789_RS25110 (SM789_25110) | 53752..54009 | + | 258 | WP_053913405 | conjugal transfer protein TrbE | - |
| SM789_RS25115 (SM789_25115) | 53996..54745 | + | 750 | WP_072354014 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| SM789_RS25120 (SM789_25120) | 54906..55142 | + | 237 | WP_000270010 | type-F conjugative transfer system pilin chaperone TraQ | - |
| SM789_RS25125 (SM789_25125) | 55129..55674 | + | 546 | WP_000059817 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| SM789_RS25130 (SM789_25130) | 55664..55978 | + | 315 | WP_001384255 | P-type conjugative transfer protein TrbJ | - |
| SM789_RS25135 (SM789_25135) | 55932..56324 | + | 393 | WP_000126338 | F-type conjugal transfer protein TrbF | - |
| SM789_RS25140 (SM789_25140) | 56311..57684 | + | 1374 | WP_000944325 | conjugal transfer pilus assembly protein TraH | traH |
| SM789_RS25145 (SM789_25145) | 57681..60497 | + | 2817 | WP_015059018 | conjugal transfer mating-pair stabilization protein TraG | traG |
| SM789_RS25150 (SM789_25150) | 60530..61051 | + | 522 | WP_000632668 | conjugal transfer entry exclusion protein TraS | - |
| SM789_RS25155 (SM789_25155) | 61076..61807 | + | 732 | WP_021559024 | conjugal transfer complement resistance protein TraT | - |
| SM789_RS25160 (SM789_25160) | 62010..62747 | + | 738 | WP_015059020 | hypothetical protein | - |
| SM789_RS25165 (SM789_25165) | 62798..65023 | + | 2226 | WP_000009363 | type IV conjugative transfer system coupling protein TraD | virb4 |