T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 50552..79025
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SM907_RS25590 (SM907_25590) | 50552..52864 | - | 2313 | WP_072101984 | type IV conjugative transfer system coupling protein TraD | virb4 |
| SM907_RS25595 (SM907_25595) | 52993..53682 | - | 690 | WP_072101983 | hypothetical protein | - |
| SM907_RS25600 (SM907_25600) | 53875..54606 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| SM907_RS25605 (SM907_25605) | 54792..55325 | - | 534 | WP_014343486 | conjugal transfer protein TraS | - |
| SM907_RS25610 (SM907_25610) | 55328..58177 | - | 2850 | WP_013609534 | conjugal transfer mating-pair stabilization protein TraG | traG |
| SM907_RS25615 (SM907_25615) | 58177..59556 | - | 1380 | WP_014343487 | conjugal transfer pilus assembly protein TraH | traH |
| SM907_RS25620 (SM907_25620) | 59534..59977 | - | 444 | WP_004194305 | F-type conjugal transfer protein TrbF | - |
| SM907_RS25625 (SM907_25625) | 60023..60580 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| SM907_RS25630 (SM907_25630) | 60552..60791 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| SM907_RS25635 (SM907_25635) | 60802..61554 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| SM907_RS25640 (SM907_25640) | 61575..61901 | - | 327 | WP_004152676 | hypothetical protein | - |
| SM907_RS25645 (SM907_25645) | 61914..62162 | - | 249 | WP_004152675 | hypothetical protein | - |
| SM907_RS25650 (SM907_25650) | 62140..62394 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| SM907_RS25655 (SM907_25655) | 62426..64381 | - | 1956 | WP_030003482 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| SM907_RS25660 (SM907_25660) | 64440..65078 | - | 639 | WP_069985712 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| SM907_RS25665 (SM907_25665) | 65091..66080 | - | 990 | WP_029497420 | conjugal transfer pilus assembly protein TraU | traU |
| SM907_RS25670 (SM907_25670) | 66077..66478 | - | 402 | WP_004194979 | hypothetical protein | - |
| SM907_RS25675 (SM907_25675) | 66513..67148 | - | 636 | WP_029497419 | type-F conjugative transfer system protein TraW | traW |
| SM907_RS25680 (SM907_25680) | 67148..67537 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| SM907_RS25685 (SM907_25685) | 67537..70176 | - | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| SM907_RS25690 (SM907_25690) | 70248..70646 | - | 399 | WP_023179972 | hypothetical protein | - |
| SM907_RS25695 (SM907_25695) | 71025..71429 | - | 405 | WP_004197817 | hypothetical protein | - |
| SM907_RS25700 (SM907_25700) | 71496..71807 | - | 312 | WP_029497417 | hypothetical protein | - |
| SM907_RS25705 (SM907_25705) | 71808..72026 | - | 219 | WP_004195468 | hypothetical protein | - |
| SM907_RS25710 (SM907_25710) | 72349..72933 | - | 585 | WP_032440547 | type IV conjugative transfer system lipoprotein TraV | traV |
| SM907_RS25715 (SM907_25715) | 73006..74430 | - | 1425 | WP_004194260 | F-type conjugal transfer pilus assembly protein TraB | traB |
| SM907_RS25720 (SM907_25720) | 74430..75170 | - | 741 | WP_013023821 | type-F conjugative transfer system secretin TraK | traK |
| SM907_RS25725 (SM907_25725) | 75157..75723 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| SM907_RS25730 (SM907_25730) | 75743..76048 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| SM907_RS25735 (SM907_25735) | 76062..76430 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| SM907_RS25740 (SM907_25740) | 76499..76699 | - | 201 | WP_004194116 | TraY domain-containing protein | - |
| SM907_RS25745 (SM907_25745) | 76785..77486 | - | 702 | WP_004194113 | hypothetical protein | - |
| SM907_RS25750 (SM907_25750) | 77716..78108 | - | 393 | WP_004194114 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| SM907_RS25755 (SM907_25755) | 78540..79025 | + | 486 | WP_032440470 | transglycosylase SLT domain-containing protein | virB1 |
| SM907_RS25760 (SM907_25760) | 79058..79387 | - | 330 | WP_071994324 | DUF5983 family protein | - |
| SM907_RS25765 (SM907_25765) | 79420..80241 | - | 822 | WP_023287138 | DUF932 domain-containing protein | - |
| SM907_RS25770 (SM907_25770) | 81071..81484 | - | 414 | WP_069985713 | type II toxin-antitoxin system HigA family antitoxin | - |
| SM907_RS25775 (SM907_25775) | 81485..81763 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| SM907_RS25780 (SM907_25780) | 81753..82073 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SM907_RS25785 (SM907_25785) | 82154..82378 | - | 225 | WP_014343499 | hypothetical protein | - |
| SM907_RS25790 (SM907_25790) | 82389..82601 | - | 213 | WP_019706020 | hypothetical protein | - |
| SM907_RS25795 (SM907_25795) | 82662..83018 | - | 357 | WP_019706019 | hypothetical protein | - |
| SM907_RS25800 (SM907_25800) | 83650..84000 | - | 351 | WP_023287104 | hypothetical protein | - |