T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 88609..115716
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SM907_RS24955 (SM907_24955) | 88609..90816 | - | 2208 | WP_320886614 | type IV conjugative transfer system coupling protein TraD | virb4 |
| SM907_RS24960 (SM907_24960) | 91001..91732 | - | 732 | WP_320886615 | conjugal transfer complement resistance protein TraT | - |
| SM907_RS24965 (SM907_24965) | 91868..92458 | - | 591 | WP_320886616 | hypothetical protein | - |
| SM907_RS24970 (SM907_24970) | 92474..95296 | - | 2823 | WP_320886617 | conjugal transfer mating-pair stabilization protein TraG | traG |
| SM907_RS24975 (SM907_24975) | 95296..96711 | - | 1416 | WP_320886618 | conjugal transfer pilus assembly protein TraH | traH |
| SM907_RS24980 (SM907_24980) | 97113..97658 | - | 546 | WP_320886619 | hypothetical protein | - |
| SM907_RS24985 (SM907_24985) | 97655..98182 | - | 528 | WP_320886705 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| SM907_RS24990 (SM907_24990) | 98202..98435 | - | 234 | WP_001568081 | type-F conjugative transfer system pilin chaperone TraQ | - |
| SM907_RS24995 (SM907_24995) | 98446..99195 | - | 750 | WP_320886620 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| SM907_RS25000 (SM907_25000) | 99211..99543 | - | 333 | WP_320886621 | hypothetical protein | - |
| SM907_RS25005 (SM907_25005) | 99540..99800 | - | 261 | WP_320886622 | conjugal transfer protein TrbE | - |
| SM907_RS25010 (SM907_25010) | 99814..101706 | - | 1893 | WP_320886623 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| SM907_RS25015 (SM907_25015) | 101703..102329 | - | 627 | WP_320886624 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| SM907_RS25020 (SM907_25020) | 102342..103325 | - | 984 | WP_162270604 | conjugal transfer pilus assembly protein TraU | traU |
| SM907_RS25025 (SM907_25025) | 103345..103974 | - | 630 | WP_320886625 | type-F conjugative transfer system protein TraW | traW |
| SM907_RS25030 (SM907_25030) | 103971..104348 | - | 378 | WP_320886626 | type-F conjugative transfer system protein TrbI | - |
| SM907_RS25035 (SM907_25035) | 104348..106987 | - | 2640 | WP_320886627 | type IV secretion system protein TraC | virb4 |
| SM907_RS25040 (SM907_25040) | 107180..107479 | - | 300 | WP_320886628 | hypothetical protein | - |
| SM907_RS25045 (SM907_25045) | 107476..107868 | - | 393 | WP_320886629 | hypothetical protein | - |
| SM907_RS25050 (SM907_25050) | 107873..108286 | - | 414 | WP_320886630 | hypothetical protein | - |
| SM907_RS25055 (SM907_25055) | 108403..108972 | - | 570 | WP_320886631 | type IV conjugative transfer system lipoprotein TraV | traV |
| SM907_RS25060 (SM907_25060) | 108991..109227 | - | 237 | WP_320886632 | DNA/RNA helicase domain-containing protein | virb4 |
| SM907_RS25065 (SM907_25065) | 109220..110632 | - | 1413 | WP_320886633 | F-type conjugal transfer pilus assembly protein TraB | traB |
| SM907_RS25070 (SM907_25070) | 110632..111372 | - | 741 | WP_001568101 | type-F conjugative transfer system secretin TraK | traK |
| SM907_RS25075 (SM907_25075) | 111359..111925 | - | 567 | WP_001568102 | type IV conjugative transfer system protein TraE | traE |
| SM907_RS25080 (SM907_25080) | 111944..112249 | - | 306 | WP_024191986 | type IV conjugative transfer system protein TraL | traL |
| SM907_RS25085 (SM907_25085) | 112263..112631 | - | 369 | WP_279925732 | type IV conjugative transfer system pilin TraA | - |
| SM907_RS25090 (SM907_25090) | 112711..113079 | - | 369 | WP_320886634 | type IV conjugative transfer system pilin TraA | - |
| SM907_RS25095 (SM907_25095) | 113158..113322 | - | 165 | WP_071594636 | TraY domain-containing protein | - |
| SM907_RS25100 (SM907_25100) | 113497..114186 | - | 690 | WP_320886635 | helix-turn-helix domain-containing protein | - |
| SM907_RS25105 (SM907_25105) | 114410..114796 | - | 387 | WP_047063078 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| SM907_RS25110 (SM907_25110) | 115231..115716 | + | 486 | WP_047063096 | transglycosylase SLT domain-containing protein | virB1 |
| SM907_RS25115 (SM907_25115) | 115749..116057 | - | 309 | WP_320886636 | DUF5983 family protein | - |
| SM907_RS25120 (SM907_25120) | 116123..116944 | - | 822 | WP_320886637 | DUF932 domain-containing protein | - |
| SM907_RS25125 (SM907_25125) | 117341..117472 | + | 132 | WP_320886638 | hypothetical protein | - |
| SM907_RS25130 (SM907_25130) | 117833..118660 | - | 828 | WP_063135963 | N-6 DNA methylase | - |
| SM907_RS25135 (SM907_25135) | 118709..118855 | - | 147 | WP_047063287 | hypothetical protein | - |
| SM907_RS25140 (SM907_25140) | 118949..119296 | - | 348 | WP_320886639 | hypothetical protein | - |
| SM907_RS25145 (SM907_25145) | 119360..119755 | - | 396 | WP_047047640 | hypothetical protein | - |
| SM907_RS25150 (SM907_25150) | 120095..120226 | + | 132 | WP_255344245 | hypothetical protein | - |
| SM907_RS25155 (SM907_25155) | 120381..120530 | + | 150 | WP_320886640 | hypothetical protein | - |