T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 7498..16588
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RI644_RS18830 (RI644_18830) | 7102..7494 | - | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| RI644_RS18835 (RI644_18835) | 7498..8076 | - | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| RI644_RS18840 (RI644_18840) | 8073..9386 | - | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| RI644_RS18845 (RI644_18845) | 9386..10303 | - | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| RI644_RS18850 (RI644_18850) | 10287..10913 | - | 627 | WP_001049716 | TraE/TraK family type IV conjugative transfer system protein | traE |
| RI644_RS18855 (RI644_18855) | 10910..11191 | - | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| RI644_RS18860 (RI644_18860) | 11336..11701 | - | 366 | WP_001052531 | hypothetical protein | - |
| RI644_RS18865 (RI644_18865) | 11713..11856 | - | 144 | WP_001275801 | hypothetical protein | - |
| RI644_RS18870 (RI644_18870) | 12037..12699 | - | 663 | WP_001231463 | hypothetical protein | - |
| RI644_RS18875 (RI644_18875) | 12699..13076 | - | 378 | WP_000869261 | hypothetical protein | - |
| RI644_RS18880 (RI644_18880) | 13086..13532 | - | 447 | WP_000122506 | hypothetical protein | - |
| RI644_RS18885 (RI644_18885) | 13542..14171 | - | 630 | WP_000743450 | DUF4400 domain-containing protein | tfc7 |
| RI644_RS18890 (RI644_18890) | 14128..14673 | - | 546 | WP_000228720 | hypothetical protein | - |
| RI644_RS18895 (RI644_18895) | 14723..16588 | - | 1866 | WP_000178856 | conjugative transfer system coupling protein TraD | virb4 |
| RI644_RS18900 (RI644_18900) | 16585..19563 | - | 2979 | WP_001337757 | MobH family relaxase | - |
| RI644_RS18905 (RI644_18905) | 19731..20348 | + | 618 | WP_001249396 | hypothetical protein | - |
| RI644_RS18910 (RI644_18910) | 20330..20563 | + | 234 | WP_001191892 | hypothetical protein | - |