T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 39892..69952
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KOCBH_RS30820 (KOCBH_B00035) | 39892..42204 | - | 2313 | WP_013214038 | type IV conjugative transfer system coupling protein TraD | virb4 |
| KOCBH_RS32895 (KOCBH_B00036) | 42331..43020 | - | 690 | WP_013023831 | hypothetical protein | - |
| KOCBH_RS30830 (KOCBH_B00037) | 43213..43942 | - | 730 | Protein_36 | conjugal transfer complement resistance protein TraT | - |
| KOCBH_RS33635 | 44043..44261 | - | 219 | WP_320406678 | hypothetical protein | - |
| KOCBH_RS30845 (KOCBH_B00040) | 45330..45857 | - | 528 | WP_032409657 | conjugal transfer protein TraS | - |
| KOCBH_RS30850 (KOCBH_B00041) | 45863..48712 | - | 2850 | WP_128697098 | conjugal transfer mating-pair stabilization protein TraG | traG |
| KOCBH_RS30855 (KOCBH_B00042) | 48712..50091 | - | 1380 | WP_072159474 | conjugal transfer pilus assembly protein TraH | traH |
| KOCBH_RS30860 (KOCBH_B00043) | 50069..50512 | - | 444 | WP_023287131 | F-type conjugal transfer protein TrbF | - |
| KOCBH_RS30865 (KOCBH_B00044) | 50558..51115 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| KOCBH_RS30870 (KOCBH_B00045) | 51087..51326 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| KOCBH_RS30875 (KOCBH_B00046) | 51337..52089 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| KOCBH_RS30880 (KOCBH_B00047) | 52110..52436 | - | 327 | WP_004152676 | hypothetical protein | - |
| KOCBH_RS30885 (KOCBH_B00048) | 52449..52697 | - | 249 | WP_013214029 | hypothetical protein | - |
| KOCBH_RS30890 (KOCBH_B00049) | 52675..52929 | - | 255 | WP_023287133 | conjugal transfer protein TrbE | - |
| KOCBH_RS30895 (KOCBH_B00050) | 52961..54916 | - | 1956 | WP_023287134 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| KOCBH_RS30900 (KOCBH_B00051) | 54975..55613 | - | 639 | WP_004193871 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| KOCBH_RS30905 (KOCBH_B00052) | 55626..56615 | - | 990 | WP_032441886 | conjugal transfer pilus assembly protein TraU | traU |
| KOCBH_RS30910 (KOCBH_B00053) | 56612..57013 | - | 402 | WP_004194979 | hypothetical protein | - |
| KOCBH_RS30915 (KOCBH_B00054) | 57048..57683 | - | 636 | WP_032441885 | type-F conjugative transfer system protein TraW | traW |
| KOCBH_RS30920 (KOCBH_B00055) | 57683..58072 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| KOCBH_RS30925 (KOCBH_B00056) | 58069..60711 | - | 2643 | WP_128697099 | type IV secretion system protein TraC | virb4 |
| KOCBH_RS30930 (KOCBH_B00057) | 60783..61181 | - | 399 | WP_023179972 | hypothetical protein | - |
| KOCBH_RS30945 (KOCBH_B00059) | 61559..61963 | - | 405 | WP_004197817 | hypothetical protein | - |
| KOCBH_RS30950 (KOCBH_B00060) | 62030..62350 | - | 321 | WP_128697101 | hypothetical protein | - |
| KOCBH_RS30955 (KOCBH_B00061) | 62351..62569 | - | 219 | WP_004195235 | hypothetical protein | - |
| KOCBH_RS30960 (KOCBH_B00062) | 62675..63085 | - | 411 | WP_004152499 | hypothetical protein | - |
| KOCBH_RS30965 (KOCBH_B00063) | 63217..63801 | - | 585 | WP_032441881 | type IV conjugative transfer system lipoprotein TraV | traV |
| KOCBH_RS30970 (KOCBH_B00064) | 63915..65339 | - | 1425 | WP_004194260 | F-type conjugal transfer pilus assembly protein TraB | traB |
| KOCBH_RS30975 (KOCBH_B00065) | 65339..66079 | - | 741 | WP_015065528 | type-F conjugative transfer system secretin TraK | traK |
| KOCBH_RS30980 (KOCBH_B00066) | 66066..66632 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| KOCBH_RS30985 (KOCBH_B00067) | 66652..66957 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| KOCBH_RS30990 (KOCBH_B00068) | 66971..67339 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| KOCBH_RS30995 | 67388..67606 | - | 219 | WP_185157841 | TraY domain-containing protein | - |
| KOCBH_RS31000 (KOCBH_B00069) | 67739..68459 | - | 721 | Protein_68 | conjugal transfer protein TrbJ | - |
| KOCBH_RS31005 (KOCBH_B00070) | 68661..69077 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KOCBH_RS31010 (KOCBH_B00071) | 69467..69952 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| KOCBH_RS33420 | 69985..70314 | - | 330 | Protein_71 | DUF5983 family protein | - |
| KOCBH_RS31015 (KOCBH_B00072) | 70347..71168 | - | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| KOCBH_RS31030 (KOCBH_B00073) | 71998..72411 | - | 414 | WP_128697102 | type II toxin-antitoxin system HigA family antitoxin | - |
| KOCBH_RS31035 (KOCBH_B00074) | 72412..72690 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| KOCBH_RS31040 (KOCBH_B00075) | 72680..72913 | - | 234 | WP_128697103 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KOCBH_RS31045 (KOCBH_B00076) | 72979..73947 | - | 969 | WP_164913933 | IS5-like element IS903 family transposase | - |
| KOCBH_RS31050 (KOCBH_B00077) | 73989..74498 | - | 510 | WP_029497411 | IS3 family transposase | - |