T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 38907..64050
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I4V29_RS23155 (I4V29_23165) | 34938..35171 | - | 234 | WP_001191890 | hypothetical protein | - |
| I4V29_RS23160 (I4V29_23170) | 35153..35770 | - | 618 | WP_001249395 | hypothetical protein | - |
| I4V29_RS23165 (I4V29_23175) | 35938..38910 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| I4V29_RS23170 (I4V29_23180) | 38907..40772 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| I4V29_RS23175 (I4V29_23185) | 40822..41367 | + | 546 | WP_000228720 | hypothetical protein | - |
| I4V29_RS23180 (I4V29_23190) | 41324..41953 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| I4V29_RS23185 (I4V29_23195) | 41963..42409 | + | 447 | WP_000122507 | hypothetical protein | - |
| I4V29_RS23190 (I4V29_23200) | 42419..42796 | + | 378 | WP_000869297 | hypothetical protein | - |
| I4V29_RS23195 (I4V29_23205) | 42796..43458 | + | 663 | WP_232796075 | hypothetical protein | - |
| I4V29_RS23200 (I4V29_23210) | 43794..44159 | + | 366 | WP_001052530 | hypothetical protein | - |
| I4V29_RS23205 (I4V29_23215) | 44304..44585 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| I4V29_RS23210 (I4V29_23220) | 44582..45208 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| I4V29_RS23215 (I4V29_23225) | 45192..46109 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| I4V29_RS23220 (I4V29_23230) | 46109..47422 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| I4V29_RS23225 (I4V29_23235) | 47419..47997 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| I4V29_RS23230 (I4V29_23240) | 48001..48393 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| I4V29_RS23235 (I4V29_23245) | 48594..54080 | + | 5487 | WP_000606835 | Ig-like domain-containing protein | - |
| I4V29_RS23240 (I4V29_23250) | 54229..54936 | + | 708 | WP_001259346 | DsbC family protein | - |
| I4V29_RS23245 (I4V29_23255) | 54933..57380 | + | 2448 | WP_000637384 | type IV secretion system protein TraC | virb4 |
| I4V29_RS23250 (I4V29_23260) | 57395..57712 | + | 318 | WP_000351984 | hypothetical protein | - |
| I4V29_RS23255 (I4V29_23265) | 57709..58239 | + | 531 | WP_001010740 | S26 family signal peptidase | - |
| I4V29_RS23260 (I4V29_23270) | 58202..59467 | + | 1266 | WP_001447719 | TrbC family F-type conjugative pilus assembly protein | traW |
| I4V29_RS23265 (I4V29_23275) | 59464..60135 | + | 672 | WP_000575345 | EAL domain-containing protein | - |
| I4V29_RS23270 (I4V29_23280) | 60135..61139 | + | 1005 | WP_005507569 | TraU family protein | traU |
| I4V29_RS23275 (I4V29_23285) | 61255..64050 | + | 2796 | WP_001256484 | conjugal transfer mating pair stabilization protein TraN | traN |
| I4V29_RS23280 (I4V29_23290) | 64089..64697 | - | 609 | WP_223152579 | hypothetical protein | - |
| I4V29_RS23285 (I4V29_23295) | 65053..65694 | - | 642 | WP_000796664 | hypothetical protein | - |
| I4V29_RS23290 (I4V29_23300) | 65989..66309 | + | 321 | WP_000547566 | hypothetical protein | - |
| I4V29_RS23295 (I4V29_23305) | 66613..66798 | + | 186 | WP_001186917 | hypothetical protein | - |
| I4V29_RS23300 (I4V29_23310) | 67018..67986 | + | 969 | WP_000085160 | AAA family ATPase | - |
| I4V29_RS23305 (I4V29_23315) | 67997..68905 | + | 909 | WP_000739139 | hypothetical protein | - |