T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 30356..66553
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L287_RS50655 (L287_23055) | 25418..26485 | + | 1068 | WP_001360287 | type IV pilus biogenesis lipoprotein PilL | - |
| L287_RS48140 (L287_23060) | 26485..26922 | + | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| L287_RS48145 (L287_23065) | 26936..28618 | + | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| L287_RS48150 (L287_23070) | 28611..29906 | + | 1296 | WP_001545757 | type 4b pilus protein PilO2 | - |
| L287_RS48155 (L287_23075) | 29893..30345 | + | 453 | WP_001247331 | type IV pilus biogenesis protein PilP | - |
| L287_RS48160 (L287_23080) | 30356..31909 | + | 1554 | WP_000362206 | ATPase, T2SS/T4P/T4SS family | virB11 |
| L287_RS48165 (L287_23085) | 31922..33007 | + | 1086 | WP_001208802 | type II secretion system F family protein | - |
| L287_RS48170 (L287_23090) | 33024..33638 | + | 615 | WP_000908226 | type 4 pilus major pilin | - |
| L287_RS48175 (L287_23095) | 33648..34208 | + | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| L287_RS48180 (L287_23100) | 34193..34849 | + | 657 | WP_001193549 | A24 family peptidase | - |
| L287_RS48185 (L287_23105) | 34849..36141 | + | 1293 | WP_001350014 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| L287_RS51435 | 36197..36322 | - | 126 | Protein_41 | RNA-guided endonuclease TnpB family protein | - |
| L287_RS48190 (L287_23110) | 36530..37354 | + | 825 | WP_001238942 | conjugal transfer protein TraE | traE |
| L287_RS48195 (L287_23115) | 37440..38642 | + | 1203 | WP_000976348 | conjugal transfer protein TraF | - |
| L287_RS48200 (L287_23120) | 38702..39286 | + | 585 | WP_000977522 | histidine phosphatase family protein | - |
| L287_RS48205 (L287_23125) | 39681..40139 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| L287_RS48210 (L287_23130) | 40136..40954 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| L287_RS48215 (L287_23135) | 40951..42099 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| L287_RS50660 | 42096..42386 | + | 291 | WP_001299214 | hypothetical protein | traK |
| L287_RS48220 (L287_23145) | 42401..42952 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| L287_RS48225 (L287_23150) | 43042..46809 | + | 3768 | WP_001141542 | LPD7 domain-containing protein | - |
| L287_RS48230 (L287_23155) | 46827..47174 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| L287_RS48235 (L287_23160) | 47171..47863 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| L287_RS48240 (L287_23165) | 47874..48857 | + | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| L287_RS48245 (L287_23170) | 48860..50149 | + | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| L287_RS48250 (L287_23175) | 50149..50853 | + | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| L287_RS48255 (L287_23180) | 50853..51380 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| L287_RS48260 (L287_23185) | 51431..51835 | + | 405 | WP_000086961 | IncI1-type conjugal transfer protein TraR | traR |
| L287_RS48265 (L287_23190) | 51899..52087 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| L287_RS48270 (L287_23195) | 52071..52871 | + | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| L287_RS48275 (L287_23200) | 52961..56005 | + | 3045 | WP_001024780 | IncI1-type conjugal transfer protein TraU | traU |
| L287_RS50665 (L287_23205) | 56005..56619 | + | 615 | WP_000337400 | IncI1-type conjugal transfer protein TraV | traV |
| L287_RS48280 (L287_23210) | 56586..57788 | + | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| L287_RS48285 (L287_23215) | 57817..58401 | + | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| L287_RS48290 (L287_23220) | 58498..60666 | + | 2169 | WP_000698357 | DotA/TraY family protein | traY |
| L287_RS48295 (L287_23225) | 60740..61390 | + | 651 | WP_001178506 | plasmid IncI1-type surface exclusion protein ExcA | - |
| L287_RS48300 (L287_23230) | 61489..61698 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| L287_RS52030 (L287_23235) | 61998..62294 | + | 297 | WP_023994106 | hypothetical protein | - |
| L287_RS52550 (L287_23240) | 62359..62454 | - | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| L287_RS48310 (L287_23245) | 63086..63994 | + | 909 | WP_000055084 | hypothetical protein | - |
| L287_RS48315 (L287_23250) | 64256..65464 | + | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| L287_RS48320 (L287_23255) | 65483..66553 | + | 1071 | WP_000151577 | IncI1-type conjugal transfer protein TrbB | trbB |
| L287_RS48325 (L287_23260) | 66546..68837 | + | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |