T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 16486..61088
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I5M56_RS24770 (I5M56_24770) | 14202..16493 | - | 2292 | WP_011264051 | F-type conjugative transfer protein TrbC | - |
| I5M56_RS24775 (I5M56_24775) | 16486..17556 | - | 1071 | WP_099010561 | IncI1-type conjugal transfer protein TrbB | trbB |
| I5M56_RS24780 (I5M56_24780) | 17575..18783 | - | 1209 | WP_011264049 | IncI1-type conjugal transfer protein TrbA | trbA |
| I5M56_RS24785 (I5M56_24785) | 19090..19872 | - | 783 | WP_023063753 | protein FinQ | - |
| I5M56_RS24790 (I5M56_24790) | 20068..20385 | + | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| I5M56_RS24795 (I5M56_24795) | 20382..20915 | - | 534 | WP_001221666 | lipocalin family protein | - |
| I5M56_RS24800 (I5M56_24800) | 21009..22154 | - | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| I5M56_RS24805 (I5M56_24805) | 22478..22813 | - | 336 | Protein_24 | transposase | - |
| I5M56_RS24810 (I5M56_24810) | 22872..23840 | - | 969 | WP_020219382 | IS5 family transposase | - |
| I5M56_RS24815 (I5M56_24815) | 23874..24806 | - | 933 | Protein_26 | IS1380-like element ISEcp1 family transposase | - |
| I5M56_RS24820 (I5M56_24820) | 24959..25333 | - | 375 | WP_223349261 | hypothetical protein | - |
| I5M56_RS24825 (I5M56_24825) | 25654..25806 | + | 153 | WP_001387489 | Hok/Gef family protein | - |
| I5M56_RS24830 (I5M56_24830) | 25878..26129 | - | 252 | WP_001291964 | hypothetical protein | - |
| I5M56_RS26875 | 26630..26725 | + | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| I5M56_RS24840 (I5M56_24840) | 26790..26966 | - | 177 | WP_001054897 | hypothetical protein | - |
| I5M56_RS24845 (I5M56_24845) | 27358..27567 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| I5M56_RS24850 (I5M56_24850) | 27639..28301 | - | 663 | WP_000644796 | plasmid IncI1-type surface exclusion protein ExcA | - |
| I5M56_RS24855 (I5M56_24855) | 28372..30540 | - | 2169 | WP_023518847 | DotA/TraY family protein | traY |
| I5M56_RS24860 (I5M56_24860) | 30637..31221 | - | 585 | WP_001746157 | IncI1-type conjugal transfer protein TraX | - |
| I5M56_RS24865 (I5M56_24865) | 31250..32452 | - | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| I5M56_RS24870 (I5M56_24870) | 32419..33033 | - | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| I5M56_RS24875 (I5M56_24875) | 33033..36077 | - | 3045 | WP_194425974 | IncI1-type conjugal transfer protein TraU | traU |
| I5M56_RS24880 (I5M56_24880) | 36167..36967 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| I5M56_RS24885 (I5M56_24885) | 36951..37139 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| I5M56_RS24890 (I5M56_24890) | 37203..37607 | - | 405 | WP_000086965 | IncI1-type conjugal transfer protein TraR | traR |
| I5M56_RS24895 (I5M56_24895) | 37658..38185 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| I5M56_RS24900 (I5M56_24900) | 38185..38889 | - | 705 | WP_001493811 | IncI1-type conjugal transfer protein TraP | traP |
| I5M56_RS24905 (I5M56_24905) | 38889..40178 | - | 1290 | WP_011264042 | conjugal transfer protein TraO | traO |
| I5M56_RS24910 (I5M56_24910) | 40181..41164 | - | 984 | WP_001191880 | IncI1-type conjugal transfer protein TraN | traN |
| I5M56_RS24915 (I5M56_24915) | 41175..41867 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| I5M56_RS24920 (I5M56_24920) | 41864..42211 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| I5M56_RS24925 (I5M56_24925) | 42229..45996 | - | 3768 | WP_194425975 | LPD7 domain-containing protein | - |
| I5M56_RS24930 (I5M56_24930) | 46086..46637 | - | 552 | WP_000014583 | phospholipase D family protein | - |
| I5M56_RS24935 (I5M56_24935) | 46652..46942 | - | 291 | WP_001299214 | hypothetical protein | traK |
| I5M56_RS24940 (I5M56_24940) | 46939..48087 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| I5M56_RS24945 (I5M56_24945) | 48084..48902 | - | 819 | WP_000646098 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| I5M56_RS24950 (I5M56_24950) | 48899..49357 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| I5M56_RS24955 (I5M56_24955) | 49752..50336 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| I5M56_RS24960 (I5M56_24960) | 50396..51598 | - | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| I5M56_RS24965 (I5M56_24965) | 51683..52507 | - | 825 | WP_001238939 | conjugal transfer protein TraE | traE |
| I5M56_RS24970 (I5M56_24970) | 52658..53812 | - | 1155 | WP_001139957 | tyrosine-type recombinase/integrase | - |
| I5M56_RS26645 | 53811..54095 | + | 285 | WP_187642572 | pilus assembly protein PilV | - |
| I5M56_RS24980 (I5M56_24980) | 55281..56582 | - | 1302 | Protein_59 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| I5M56_RS24985 (I5M56_24985) | 56582..57238 | - | 657 | WP_001193553 | prepilin peptidase | - |
| I5M56_RS24990 (I5M56_24990) | 57223..57783 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| I5M56_RS24995 (I5M56_24995) | 57793..58407 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| I5M56_RS25000 (I5M56_25000) | 58425..59522 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| I5M56_RS25005 (I5M56_25005) | 59535..61088 | - | 1554 | WP_000362202 | GspE/PulE family protein | virB11 |
| I5M56_RS25010 (I5M56_25010) | 61099..61551 | - | 453 | WP_001247334 | type IV pilus biogenesis protein PilP | - |
| I5M56_RS25015 (I5M56_25015) | 61538..62833 | - | 1296 | WP_000752772 | type 4b pilus protein PilO2 | - |
| I5M56_RS25020 (I5M56_25020) | 62826..64508 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| I5M56_RS25025 (I5M56_25025) | 64522..64959 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| I5M56_RS25030 (I5M56_25030) | 64959..66026 | - | 1068 | WP_001302629 | type IV pilus biogenesis lipoprotein PilL | - |