T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 26374..53717
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IY169_RS00975 | 22047..22844 | - | 798 | WP_015059991 | OXA-48 family carbapenem-hydrolyzing class D beta-lactamase OXA-48 | - |
| IY169_RS00980 | 23063..23760 | + | 698 | WP_095033700 | IS1-like element IS1B family transposase | - |
| IY169_RS00985 | 23757..24962 | + | 1206 | WP_025987686 | IS4-like element IS10A family transposase | - |
| IY169_RS00990 | 24977..25411 | - | 435 | Protein_40 | CPBP family intramembrane glutamate endopeptidase | - |
| IY169_RS00995 | 25491..25874 | + | 384 | WP_019725042 | DUF1496 domain-containing protein | - |
| IY169_RS01000 | 26099..26374 | + | 276 | WP_004206888 | lytic transglycosylase domain-containing protein | - |
| IY169_RS01005 | 26374..27681 | + | 1308 | WP_015059988 | hypothetical protein | trbA |
| IY169_RS01010 | 27692..28642 | + | 951 | WP_004206886 | DsbC family protein | trbB |
| IY169_RS01015 | 28655..30742 | + | 2088 | WP_004206885 | conjugal transfer protein TrbC | - |
| IY169_RS30480 | 30793..30888 | - | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| IY169_RS01020 | 32111..33166 | - | 1056 | WP_015060006 | plasmid replication initiator RepA | - |
| IY169_RS01025 | 33462..33692 | - | 231 | WP_011091085 | IncL/M type plasmid replication protein RepC | - |
| IY169_RS01030 | 33773..34426 | - | 654 | WP_015060005 | hypothetical protein | - |
| IY169_RS01035 | 34428..36623 | - | 2196 | WP_015062834 | DotA/TraY family protein | traY |
| IY169_RS01040 | 36616..37212 | - | 597 | WP_015060003 | hypothetical protein | - |
| IY169_RS01045 | 37209..38294 | - | 1086 | WP_228719183 | conjugal transfer protein TraW | traW |
| IY169_RS01050 | 38414..41464 | - | 3051 | WP_004187482 | hypothetical protein | traU |
| IY169_RS01055 | 41461..41955 | - | 495 | WP_004187480 | hypothetical protein | - |
| IY169_RS01060 | 42001..42390 | - | 390 | WP_004187479 | DUF6750 family protein | traR |
| IY169_RS01065 | 42407..42937 | - | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| IY169_RS01070 | 42961..43665 | - | 705 | WP_015060002 | conjugal transfer protein TraP | traP |
| IY169_RS01075 | 43677..45026 | - | 1350 | WP_004187474 | conjugal transfer protein TraO | traO |
| IY169_RS01080 | 45038..46189 | - | 1152 | WP_004187471 | DotH/IcmK family type IV secretion protein | traN |
| IY169_RS01085 | 46198..46911 | - | 714 | WP_004187467 | DotI/IcmL family type IV secretion protein | traM |
| IY169_RS01090 | 46979..47389 | + | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| IY169_RS01095 | 47418..47573 | + | 156 | WP_172693602 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| IY169_RS01100 | 47574..48086 | - | 513 | WP_011091071 | hypothetical protein | traL |
| IY169_RS30080 | 48052..51489 | - | 3438 | WP_015586048 | LPD7 domain-containing protein | - |
| IY169_RS01110 | 51514..51774 | - | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| IY169_RS01115 | 51764..52927 | - | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| IY169_RS01120 | 52938..53717 | - | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| IY169_RS01125 | 53714..54214 | - | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| IY169_RS01130 | 54228..56207 | - | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| IY169_RS30085 | 56194..56721 | - | 528 | WP_172740549 | plasmid mobilization protein MobA | - |
| IY169_RS01140 | 56756..57151 | + | 396 | WP_019725163 | hypothetical protein | - |
| IY169_RS01145 | 57653..58189 | - | 537 | WP_004187332 | hypothetical protein | - |
| IY169_RS01150 | 58322..58633 | - | 312 | WP_004187333 | hypothetical protein | - |