T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 31564..59193
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS249_RS00245 (pEL60p38) | 26649..26960 | + | 312 | WP_011154461 | hypothetical protein | - |
| HS249_RS00250 (pEL60p39) | 27093..27629 | + | 537 | WP_011091066 | hypothetical protein | - |
| HS249_RS00255 (pEL60p40) | 28130..28525 | - | 396 | WP_172682140 | MobC | - |
| HS249_RS00415 | 28524..29087 | + | 564 | WP_020277892 | plasmid mobilization protein MobA | - |
| HS249_RS00265 (pEL60p42) | 29074..31053 | + | 1980 | WP_011154463 | TraI/MobA(P) family conjugative relaxase | - |
| HS249_RS00270 (pEL60p43) | 31067..31567 | + | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| HS249_RS00275 (pEL60p44) | 31564..32343 | + | 780 | WP_011154464 | type IV secretory system conjugative DNA transfer family protein | traI |
| HS249_RS00280 (pEL60p45) | 32354..33517 | + | 1164 | WP_011154465 | plasmid transfer ATPase TraJ | virB11 |
| HS249_RS00285 | 33507..33767 | + | 261 | WP_168397230 | IcmT/TraK family protein | traK |
| HS249_RS00420 | 33792..37172 | + | 3381 | WP_011154466 | LPD7 domain-containing protein | - |
| HS249_RS00295 (pEL60p47) | 37096..37650 | + | 555 | WP_011154467 | hypothetical protein | traL |
| HS249_RS00300 | 37651..37848 | - | 198 | WP_004187464 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| HS249_RS00305 | 37835..38245 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| HS249_RS00310 (pEL60p49) | 38244..39026 | + | 783 | WP_004206929 | DotI/IcmL family type IV secretion protein | traM |
| HS249_RS00315 (pEL60p50) | 39035..40186 | + | 1152 | WP_011154469 | DotH/IcmK family type IV secretion protein | traN |
| HS249_RS00320 (pEL60p51) | 40198..41547 | + | 1350 | WP_011154470 | conjugal transfer protein TraO | traO |
| HS249_RS00325 (pEL60p52) | 41559..42263 | + | 705 | WP_011154471 | conjugal transfer protein TraP | traP |
| HS249_RS00330 (pEL60p53) | 42287..42817 | + | 531 | WP_011091077 | conjugal transfer protein TraQ | traQ |
| HS249_RS00335 (pEL60p54) | 42834..43223 | + | 390 | WP_011154472 | DUF6750 family protein | traR |
| HS249_RS00340 (pEL60p55) | 43269..43763 | + | 495 | WP_011154473 | hypothetical protein | - |
| HS249_RS00345 (pEL60p56) | 43760..46810 | + | 3051 | WP_011154474 | conjugative transfer protein | traU |
| HS249_RS00350 (pEL60p57) | 46807..48015 | + | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| HS249_RS00355 (pEL60p58) | 48012..48662 | + | 651 | WP_011154475 | hypothetical protein | - |
| HS249_RS00360 (pEL60p59) | 48655..50835 | + | 2181 | WP_004187492 | DotA/TraY family protein | traY |
| HS249_RS00365 (pEL60p60) | 50838..51491 | + | 654 | WP_011154477 | hypothetical protein | - |
| HS249_RS00370 (pEL60p61) | 51553..51795 | + | 243 | WP_023893611 | IncL/M type plasmid replication protein RepC | - |
| HS249_RS00375 (pEL60p63) | 52081..53148 | + | 1068 | WP_168397220 | plasmid replication initiator RepA | - |
| HS249_RS00380 | 54153..54290 | + | 138 | Protein_75 | type II toxin-antitoxin system CcdA family antitoxin | - |
| HS249_RS00425 | 54679..54774 | + | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| HS249_RS00385 (pEL60p64) | 54825..56912 | - | 2088 | WP_011154480 | conjugative transfer protein | - |
| HS249_RS00390 (pEL60p65) | 56925..57875 | - | 951 | WP_168397222 | DsbC family protein | trbB |
| HS249_RS00395 (pEL60p66) | 57886..59193 | - | 1308 | WP_011154482 | hypothetical protein | trbA |
| HS249_RS00400 (pEL60p67) | 59193..59588 | - | 396 | WP_011154483 | lytic transglycosylase domain-containing protein | - |
| HS249_RS00405 (pEL60p68) | 59693..60088 | - | 396 | WP_011154484 | DUF1496 domain-containing protein | - |