T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 2538..29881
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IY229_RS22725 | 48..2027 | + | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| IY229_RS22730 | 2041..2541 | + | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| IY229_RS22735 | 2538..3317 | + | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| IY229_RS22740 | 3328..4491 | + | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| IY229_RS22745 | 4481..4741 | + | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| IY229_RS23245 | 4766..8203 | + | 3438 | WP_015586048 | LPD7 domain-containing protein | - |
| IY229_RS22755 | 8169..8681 | + | 513 | WP_011091071 | hypothetical protein | traL |
| IY229_RS22760 | 8682..8894 | - | 213 | WP_305953721 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| IY229_RS22765 | 8866..9276 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| IY229_RS22770 | 9344..10057 | + | 714 | WP_004187467 | DotI/IcmL family type IV secretion protein | traM |
| IY229_RS22775 | 10066..11217 | + | 1152 | WP_004187471 | DotH/IcmK family type IV secretion protein | traN |
| IY229_RS22780 | 11229..12578 | + | 1350 | WP_004187474 | conjugal transfer protein TraO | traO |
| IY229_RS22785 | 12590..13294 | + | 705 | WP_015060002 | conjugal transfer protein TraP | traP |
| IY229_RS22790 | 13318..13848 | + | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| IY229_RS22795 | 13865..14254 | + | 390 | WP_004187479 | DUF6750 family protein | traR |
| IY229_RS22800 | 14300..14794 | + | 495 | WP_004187480 | hypothetical protein | - |
| IY229_RS22805 | 14791..17841 | + | 3051 | WP_004187482 | hypothetical protein | traU |
| IY229_RS22810 | 17838..19046 | + | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| IY229_RS22815 | 19043..19639 | + | 597 | WP_032419542 | hypothetical protein | - |
| IY229_RS22820 | 19632..21827 | + | 2196 | WP_015062834 | DotA/TraY family protein | traY |
| IY229_RS22825 | 21829..22482 | + | 654 | WP_015060005 | hypothetical protein | - |
| IY229_RS22830 | 22563..22793 | + | 231 | WP_011091085 | IncL/M type plasmid replication protein RepC | - |
| IY229_RS22835 | 23089..24144 | + | 1056 | WP_015060006 | plasmid replication initiator RepA | - |
| IY229_RS23285 | 25367..25462 | + | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| IY229_RS22840 | 25513..27600 | - | 2088 | WP_004206885 | conjugal transfer protein TrbC | - |
| IY229_RS22845 | 27613..28563 | - | 951 | WP_004206886 | DsbC family protein | trbB |
| IY229_RS22850 | 28574..29881 | - | 1308 | WP_015059988 | hypothetical protein | trbA |
| IY229_RS22855 | 29881..30276 | - | 396 | WP_004187436 | lytic transglycosylase domain-containing protein | - |
| IY229_RS22860 | 30381..30731 | - | 351 | WP_124065455 | DUF1496 domain-containing protein | - |
| IY229_RS22865 | 30844..31278 | + | 435 | Protein_30 | CPBP family intramembrane glutamate endopeptidase | - |
| IY229_RS22870 | 31293..32498 | - | 1206 | WP_025987686 | IS4-like element IS10A family transposase | - |
| IY229_RS22880 | 33411..34208 | + | 798 | WP_015059991 | OXA-48 family carbapenem-hydrolyzing class D beta-lactamase OXA-48 | - |